AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21489 ATGCCGAAATCCACCGCCGTCAAAATCACCTACAATCTCGAATACCGGTCGAAGGATGACGACGCGTGGTACGTTACCGGCGTCATTTTCGAAAAAGGAAACCGTCTTCGCGTAAAGTTTAAAGACTTTCCGGAACGCTACTACGATGAGGTTTTCTCGATCTCCGATTTCTCTAATCACGATGATTTCGATGAATTCATCGGTCGATTCCGTCAGATACCTGAAGCCGTCGAAGATCACGAGTGCAGGAAGGTGACTCAAGGCATGACGGTTTGTGCTTTATACGAGGACAAAAATGATGGATCGCTTCGATACTTTGACGCCGTTGTTGATGATGTGTATTACAAAGAGCATACGCCTGAGAAGTGTATATGTGAATATTCTTTGTTCTGGCAATGTGGTCCTGAGGAGGGAAATGTAACCGCAGCAACACTTGATCATATATGGATCATCAACACGACTAGTCCTGTTGATCCGATAGTGTCTGACTTTGCGAAGCTTGTGGAGGGAAAACTCGGAGGGATGTCTTCTCAGTCGTATGGTGGTGCGGTAAACAAATCTGACATTAGACTATTATCTGAAGGGAGAGAAAGGTTCTGCTATGAATTAAGTGATGACGACAGAGATATGGAAGGTTTTAAAGAACTAGGGGAAAGGTTATGCTATGATATAAGTGATGACGACAGAGATGTGGGAGGTTTAAAAGAACTCGGCTGCCATCATTACATTATATTAGAAAATTTGGAGAAAGATCTATGCCCAATATTAATGATGCAGTTCATACATGAGCAGATGTCAATCACAGCACATACATACGTTTTCCCAAATTTGTCGGTGGAAACATATGCACGTGGAGCAATCATGGCTGATAGCAGCTCAAATCTAAAAAGGATATATGATTTTATAAACAATCCAAATCACTGTATTGTATCTCTCTCTGGAAGGCCATGGGTAATAGCTGAAGAAATGCTTAAGACTGGAACTTTCAACCCAAGCCTGCGGAACTTGCAGCCAAGGTTTAAGAATATGTATACCGGGAGCAAGTTATTGGTTGTTCAGCTAGGTACAGACGAATTCAGGAGAGCTAAAAAGCTAAAAGATCTATTTATTGAATATCGTAATCATCTAAATGGACTTGCGCGGAGGTTAGAGATGGAGGAGAAGAAGAACCAGCATCCATCCAGTCATCCACTGCAAATTAGTTCCTGCAAGTCATAG 1218 42.2 MPKSTAVKITYNLEYRSKDDDAWYVTGVIFEKGNRLRVKFKDFPERYYDEVFSISDFSNHDDFDEFIGRFRQIPEAVEDHECRKVTQGMTVCALYEDKNDGSLRYFDAVVDDVYYKEHTPEKCICEYSLFWQCGPEEGNVTAATLDHIWIINTTSPVDPIVSDFAKLVEGKLGGMSSQSYGGAVNKSDIRLLSEGRERFCYELSDDDRDMEGFKELGERLCYDISDDDRDVGGLKELGCHHYIILENLEKDLCPILMMQFIHEQMSITAHTYVFPNLSVETYARGAIMADSSSNLKRIYDFINNPNHCIVSLSGRPWVIAEEMLKTGTFNPSLRNLQPRFKNMYTGSKLLVVQLGTDEFRRAKKLKDLFIEYRNHLNGLARRLEMEEKKNQHPSSHPLQISSCKS 405
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21489 405 PANTHER SAWADEE PROTEIN 9 389 - -
Pslu1g21489 405 Gene3D - 77 147 - -
Pslu1g21489 405 MobiDBLite consensus disorder prediction 386 405 - -
Pslu1g21489 405 Pfam SAWADEE domain 10 148 IPR032001 GO:0003682(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21489 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:154300324 Pslu1g21491 Pslu-Chr1:154311530 dispersed
Pslu Pslu-Chr1:154300324 Pslu1g21490 Pslu-Chr1:154305120 tandem