AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21490 ATGTCGATTTCCACCGCCGTCAATATAGCCTACGATATCGAATACCGATCGAAGGCCGATGACGCCTGGTACCTTTCCGGCGCCGTTTTCGAAAACGGAAACCGCCTACGCGTAAAGTTTAAGGAATTCCCGCAAAGCTACTACGATGAGGTTTTCTCGATCGACGATTTTTCAAATCACGATGACATTGATGAGTTTATCGGTCGATTCCGTCGTGTTTCTCGACCGATCGAAGATAACGAGTGCTCGAAAGTGATTCAAGGCATGACGGTTTGTGCTATGTATAGAGGCTTTGATGGATCGGTTAAATACTTCGACGCCATTGTTGATGATGCGTGTTACAAAGAGCATACGCCGGCAAAGTGTGAATGCAGGTATTCTTTGTTTTGGCAACATGGTCCTGAAAACGGCAACATAACCGCAACAACGCTTGATGATATGTGGATCAACACGACTGGTGATGTTAATCCCATAGTGGCGGACTTCACGAAGCTCGTGAACGAAAAACTTATAGGGATCTGTTCTCAGGACGGTGGTTCGGGAAACATTTCTCATGTTAGATTGTCTGAAGGGAGAGAAAGGTTCTGCTATGAGTTAAGTGATGATGACAGAGATGTGGGAGGTTTTGAAGAAGTTGGGTGTCATCATTACATAATTCTAGAAAATCTGGAGAAAGATCTATGCCCAATTTTAATGATGCAGTTCATGCATGATCAAACTTCAGTCACAGGACAGGCATACGTCTTCCCAAATTTGTCGGTGGAAACATATGCAAGAGGAATAATCATGGTAGATAGCAGATCAAATCTAAAAAAGATTTTTGAATTTATAAACAGTCCAAATCATATTATTGTATCTTTCTCTGGAAGGCCATGGGTGATAGCTGAAGAAACACTTAAGACTGGAACTTTCAACACAAACCTGCGGAACTTAGAGCCTAGGTTTAAGAACATATGTACGGGGAGGGAGTTAATGGTTGTTCGGCTTGGAACAGATGAATACAGGAGAGCTAAACAGCTAAAAGATCTGTTTATGGAATATCGCATTCATCTAAATGGACTTGCACGCAGGTTAGACACGGAGGAGAAGAAGAACCAACATCCACCCACTGCAAATTAG 1119 42.72 MSISTAVNIAYDIEYRSKADDAWYLSGAVFENGNRLRVKFKEFPQSYYDEVFSIDDFSNHDDIDEFIGRFRRVSRPIEDNECSKVIQGMTVCAMYRGFDGSVKYFDAIVDDACYKEHTPAKCECRYSLFWQHGPENGNITATTLDDMWINTTGDVNPIVADFTKLVNEKLIGICSQDGGSGNISHVRLSEGRERFCYELSDDDRDVGGFEEVGCHHYIILENLEKDLCPILMMQFMHDQTSVTGQAYVFPNLSVETYARGIIMVDSRSNLKKIFEFINSPNHIIVSFSGRPWVIAEETLKTGTFNTNLRNLEPRFKNICTGRELMVVRLGTDEYRRAKQLKDLFMEYRIHLNGLARRLDTEEKKNQHPPTAN 372
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21490 372 Pfam SAWADEE domain 11 147 IPR032001 GO:0003682(InterPro)
Pslu1g21490 372 Gene3D - 77 145 - -
Pslu1g21490 372 PANTHER SAWADEE PROTEIN 10 364 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21490 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:154300324 Pslu1g21490 Pslu-Chr1:154305120 tandem
Pslu Pslu-Chr1:154305120 Pslu1g21491 Pslu-Chr1:154311530 tandem