Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pslu1g21491 | ATGGTGGTTATCGACGGCGTTAACGTATCGTACACTTTCGATTACCGGTCGACGAACGATGACGCGTGGTACAACTGCGGCATCGTTCTCGATCGCGGAAAACAGCAGCTTCGCGTTAAGTTTGAGCATTTCCAGCAGATAGAACATGACGAGGTTTTCTCGACTACTGATTTCAAAGATCGAGATGAACTCGATGAATTCCTCGCTAGATTCCGTCCAGTTTCACAGGCGCTTTACGATCACGAGTGCTCCAAAGTGATTGAAGGAATGACGGTTTGTGCTACCTATGGAGATGAAGATTCACTTCGATACTTTGACGCCGTCGTTGATGCTGTGTATTACAAAGAGCATACGGCTGAGAAGTGCCTATGCACCTTTATGTTATTCTGGCAGCATGGTCCTCAAGAGGGAAATATTACAGCAACAAAACTTGAGAATGTAAGCCTCATACGGCATGGTGCTGGTGATCCCATACTTGTCAAATTCACAAAGCTTGTGGAGGAAAAGCTTAGAGGGCCCTCTTCTGAGTTTTTTCTGATCCCAAAGAGCTCGTTTTTGTCTAAAATAACAAGCTCAAGTGAAACTCTCTTATCAGAGGAGTTTGGCAGTGTGGGACAGAGTTCTCACGTTGGATGCTTTGAAGGGAGGGAAAGGTTATTCCCTGAGTTGAGTGATCAGGACAGAGAGTTGGGAGGTATCAAAGAAACTGGACATCATCATTACATAATGATAGAAAATTTGGAGAGAGATTTATGCCCGACATCAATGATGATGTTCATGCATGAGCAAACTTCAATCACAGCACAGGCATACGTTTTCCCAAACTTGTCAGTAGAAACGTATGCAAGAGGAGCAATTGTGGTGGACAGTAAATCAAATCTCAAGAGGATATATGAATTTATAAACAATCCAAATCAGTTTATTGTATCTTCAACTGGAAGGCCATGGGTAATAGCTGAAGACAAACTTAGGATTGGAAATTTCAAGACAAACCTGCAGGGCTTGCAGCCGCGGCTTGAGAACTTAAATGTAGATGGTGAACTGAAAGTCGTCTGGTTAGGAACAGAAGAGTACAAGAAAGCTAAACAACTAAAAGATCTCTTTGTGGAATATCGTAATCATCTAAATGGACTTGCGGAAAGATATACTGGTGTATTGGATGCAAAAGTTTTTGAAGAATCGTTTGGCAAAATTTATCTAGGCAATAATATCCTCACTATCAATGTGTCTAGATATCAAAGGAAGATTAGGGTTTATCATCCAAACACCAATCAACATCATAAATCTAAGCCTGCACCACCTCCTTCTGCGCCTATGTCTGCTTGGGGTTTTTGTGGTAACAGAAGTTTCGCTAATGTAGTTTCTGGTAATAGCAAGGCGGTTCAGGAAAACCCTATTCATATCAAACTTTGCCCATCCCAGGAGTTAGATATGGTGCTCTCTGAAACATTCTTAGTTGGTGAGGTTTTCGATTCAGAAATCTTAAAGGCTATTCCTAACTTACTCAAAGATGGTGGCATTAATTTCGGTAGAGTCTTCTTTTACGGTGGACTTTATGTTTTGATTGGTTTTGATGACAAAGCTGAAGCCATAGGGTTAATTGAAAACAAGGAATGCTGGAGCATATGGTTTAACCGGATTCAAATGGGCAATCATGTAACCGATCTAAAATATCAAAGAGCATCAGATATCGAAATTGTGGGTCTTCCCATGAAATATCGTTCGCCTGATAACATTACTAAAATTCTTAGCAACTTTGGTAAAGTATTAATGGTGGAAAATGATATCTGGAAAAACGATTTATCGCATTGCACGGGTTGTATCTTAACAGAATCATTGTCTAAGATTAATGAAGTCATCACCATTGAAATCGAAGACAATAAATATATATCCATTGGAATTATTGAAAAGGAATTCGGATTGAAACCATTTGGTGATGACGGCTTATGGGGTGAAGATGATTCAAAAGAAGTTAAGGATTCGGTCGATAACGAACACTTGGAGAATGAGTCAATGGATAGTGATAACTTTACTGATTCATCCGACACTGAATGGGAAGAAGGTGAGTTTAGGCCTGCCGATCCAGTTGATCCTATGGAGGTTTCGAATAAGTTTTCTCCGGTGAATGTCGAATGTTTCCCGGCCGATGAGGTTTCTGGCACTGCAATTAATGCGTCTAATAATCCTGTTATCGAAGAAACGGTTATCGAAGAGTCCTGCGGTTGTGCTAATGTTCCCCATGCAAATCATGTTGCATTTGATTCGGCGCCAAACATTCAAATTCCATGGGGCCCATTAGTGATGTTAATCAGTTGGGCTCATTATTTTATGTGA | 2334 | 40.66 | MVVIDGVNVSYTFDYRSTNDDAWYNCGIVLDRGKQQLRVKFEHFQQIEHDEVFSTTDFKDRDELDEFLARFRPVSQALYDHECSKVIEGMTVCATYGDEDSLRYFDAVVDAVYYKEHTAEKCLCTFMLFWQHGPQEGNITATKLENVSLIRHGAGDPILVKFTKLVEEKLRGPSSEFFLIPKSSFLSKITSSSETLLSEEFGSVGQSSHVGCFEGRERLFPELSDQDRELGGIKETGHHHYIMIENLERDLCPTSMMMFMHEQTSITAQAYVFPNLSVETYARGAIVVDSKSNLKRIYEFINNPNQFIVSSTGRPWVIAEDKLRIGNFKTNLQGLQPRLENLNVDGELKVVWLGTEEYKKAKQLKDLFVEYRNHLNGLAERYTGVLDAKVFEESFGKIYLGNNILTINVSRYQRKIRVYHPNTNQHHKSKPAPPPSAPMSAWGFCGNRSFANVVSGNSKAVQENPIHIKLCPSQELDMVLSETFLVGEVFDSEILKAIPNLLKDGGINFGRVFFYGGLYVLIGFDDKAEAIGLIENKECWSIWFNRIQMGNHVTDLKYQRASDIEIVGLPMKYRSPDNITKILSNFGKVLMVENDIWKNDLSHCTGCILTESLSKINEVITIEIEDNKYISIGIIEKEFGLKPFGDDGLWGEDDSKEVKDSVDNEHLENESMDSDNFTDSSDTEWEEGEFRPADPVDPMEVSNKFSPVNVECFPADEVSGTAINASNNPVIEETVIEESCGCANVPHANHVAFDSAPNIQIPWGPLVMLISWAHYFM | 777 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pslu1g21491 | 777 | Pfam | SAWADEE domain | 11 | 147 | IPR032001 | GO:0003682(InterPro) | |
| Pslu1g21491 | 777 | MobiDBLite | consensus disorder prediction | 652 | 698 | - | - | |
| Pslu1g21491 | 777 | PANTHER | SAWADEE PROTEIN | 10 | 382 | - | - | |
| Pslu1g21491 | 777 | Gene3D | - | 78 | 148 | - | - | |
| Pslu1g21491 | 777 | MobiDBLite | consensus disorder prediction | 652 | 673 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pslu1g21491 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pslu | Pslu-Chr1:154300324 | Pslu1g21491 | Pslu-Chr1:154311530 | dispersed | |
| Pslu | Pslu-Chr1:154311530 | Pslu5g03327 | Pslu-Chr5:23623963 | dispersed | |
| Pslu | Pslu-Chr6:99310453 | Pslu1g21491 | Pslu-Chr1:154311530 | dispersed | |
| Pslu | Pslu-Chr1:154305120 | Pslu1g21491 | Pslu-Chr1:154311530 | tandem |