Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pslu1g21494 | ATGATGTTTTGGACATTTTCAACGATTGTTATCATATCCTCGTTAGCAATGACTCATGTTTCCGGGATTAGATTTGTGATCGATAGACAAGAATGTTTGTCTCATAATGTTGATTTTGAAGGTGATACGGTTCATTTATCTTTTGTTGTAATTAAGGCAGAATCCCCCTGGCATTTTTCTGAAGATGGTGTAGATCTTGTGATAAAGGGCCCATCTGGAGAGGTGGTATACGATGTACAAGATAGTACTAGCGAAAAACATGAGTTTATAGCTCATAAGAATGGTTTATTTCATTTTTGCTTTACGAACAAGTCTCCATATCATGAAACCGTAGACTTTGATGTACAAGTTGGCCATTTTGCATACCATGATCAACACGTAAAAGATGAGCATTTCAAGCCATTGCTTGAACAAATAGCAAAACTGGAGGAAGCTCTATACAACATACAGTTTGAACAACACTGGTTACAGGCAGAGAATGAACGCCAGGCAGTTATAAATGAAAAAATGTGTAACAGAGCAGTCCATAAAGCGCTGTTTGAGTCAGCAGCACTGATCGGTGCTAGTGTCCTTCAGGTTTATCTTCTGCAACGTCTGTTTGAGCGAAAAATGGGGACATCTAGAGTGTAA | 630 | 38.57 | MMFWTFSTIVIISSLAMTHVSGIRFVIDRQECLSHNVDFEGDTVHLSFVVIKAESPWHFSEDGVDLVIKGPSGEVVYDVQDSTSEKHEFIAHKNGLFHFCFTNKSPYHETVDFDVQVGHFAYHDQHVKDEHFKPLLEQIAKLEEALYNIQFEQHWLQAENERQAVINEKMCNRAVHKALFESAALIGASVLQVYLLQRLFERKMGTSRV | 209 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pslu1g21494 | 209 | PANTHER | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN | 5 | 201 | IPR015720 | GO:0005783(PANTHER)|GO:0005793(PANTHER)|GO:0005794(PANTHER)|GO:0006886(PANTHER)|GO:0006888(PANTHER)|GO:0007030(PANTHER)|GO:0030134(PANTHER) | |
| Pslu1g21494 | 209 | ProSiteProfiles | GOLD domain profile. | 30 | 117 | IPR009038 | - | |
| Pslu1g21494 | 209 | SMART | EMP24-GP25L-2 | 22 | 201 | IPR009038 | - | |
| Pslu1g21494 | 209 | Pfam | emp24-gp25L-p24 family-GOLD | 29 | 201 | IPR009038 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pslu1g21494 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 134944 | Pslu1g21494 | Pslu3g16410 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pslu | Pslu-Chr1:154322390 | Pslu2g00470 | Pslu-Chr2:3094307 | dispersed | |
| Pslu | Pslu-Chr1:154322390 | Pslu3g16410 | Pslu-Chr3:117600251 | wgd |