Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pslu1g21499 | ATGACATTCCGTAATCAAACTTGTTCAAGGAATGAAGCTGGAAGTGCATTTCAAAATATATCAGGAGCAACTATTTTAGGTAAAATGGAAAATTTGTTAAAGGGTTCTGAAAATGAAGTTGATCAAGTCGACATGCTGAATGCTACTTATGATGGTTATGGAGGTGTCATTGTGAAAGTTGAAGACGATATGGACGAAAATATCTTCACCACTTTACTTCAAACATCACTTTCCCAATGGAGGCTGCAGGAAAAGAAGGGAGTTTGGCTCAAATTGCCACTTGAACTTGTGAATCTTGTTAAGCCTGCAGTAAAGGAAGGATTTTGGTACCATCATGCCGAACCAACATACTTGATGCTCGTGTATTGGATCCCTGAAACTAATAACACTCTCCCACCAAATGCTTCCCATCGAGTCGGTGTTGCTTCATTTGTGGTCAACGATAATGGGGAGCTTCTTGTGGTCCAAGAAAAAAGTGGAGTGTTCAAAGGCTCAGGGGTCTGGAAGTTACCAACTGGTACTGTTGAGGAGGGTGAAGATTTAAGTGCAGCTGCAATCAGGGAAGTGAAAGAAGAGGCTGGAATTGATACAGATTTCATGGAAGTCCTTGCATTCAGGCAAAGCCACAAGTCATTTTATACTAAGTCGGATCTAATGTTTGTGTGTATGCTAAAACCAATATCATTCGATATTGTCAAGCAAGATTCAGAGATTGAAGCAGCACAGTGGATGCCAGTGGAAGAATATGCTAACCAACCCTTTATTAAAGAACACAAATCCTTTGACTACATTGCTAAAATATGCATAGCGAAAAAAGATAACAAATATGATGGCTTCTCTGCATTGCCTACATCAACAGCTACATCTGCCAAAAAGAGCTATTTGTATTCCAGTTATCAAGACCACTGTTGGTTAGTTTATACGAGTAGTTCAAGTTTGAACGTTTCTGAGAAACCACGAGATGGTTATGGTGATGGTGTAACATCAGTATCTCCACCAGCTGCATGTCAATATCCATGCGGCCCTCAACCTCCTCTACAACAACCACCACCGCCTCCACCGCGTGGAGGAAGTGCGATATATGGTGGTCCACCACCTCCTGCAGGCGTTAATTGTCCACCTGTGACTCCTGTTATGTGCTGCCAAAACTCACCTCCTAATCCCATGCCTAATTATGGTTATCCTAATTATGGAAATTATACAGAAAGCTCTAGCTTTTCGAGTACCCCGTGTTATGCTATGCTGCTGTTGATTCCTTTTGTCTTTGTTTTTGGTGTTTGA | 1281 | 41.45 | MTFRNQTCSRNEAGSAFQNISGATILGKMENLLKGSENEVDQVDMLNATYDGYGGVIVKVEDDMDENIFTTLLQTSLSQWRLQEKKGVWLKLPLELVNLVKPAVKEGFWYHHAEPTYLMLVYWIPETNNTLPPNASHRVGVASFVVNDNGELLVVQEKSGVFKGSGVWKLPTGTVEEGEDLSAAAIREVKEEAGIDTDFMEVLAFRQSHKSFYTKSDLMFVCMLKPISFDIVKQDSEIEAAQWMPVEEYANQPFIKEHKSFDYIAKICIAKKDNKYDGFSALPTSTATSAKKSYLYSSYQDHCWLVYTSSSSLNVSEKPRDGYGDGVTSVSPPAACQYPCGPQPPLQQPPPPPPRGGSAIYGGPPPPAGVNCPPVTPVMCCQNSPPNPMPNYGYPNYGNYTESSSFSSTPCYAMLLLIPFVFVFGV | 426 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pslu1g21499 | 426 | ProSitePatterns | Nudix box signature. | 173 | 194 | IPR020084 | GO:0016787(InterPro) | |
| Pslu1g21499 | 426 | FunFam | nudix hydrolase 2 | 43 | 129 | - | - | |
| Pslu1g21499 | 426 | PRINTS | NUDIX hydrolase family signature | 182 | 197 | IPR020476 | - | |
| Pslu1g21499 | 426 | PRINTS | NUDIX hydrolase family signature | 168 | 182 | IPR020476 | - | |
| Pslu1g21499 | 426 | Gene3D | Nucleoside Triphosphate Pyrophosphohydrolase | 138 | 277 | - | - | |
| Pslu1g21499 | 426 | MobiDBLite | consensus disorder prediction | 341 | 363 | - | - | |
| Pslu1g21499 | 426 | Pfam | NUDIX domain | 137 | 259 | IPR000086 | - | |
| Pslu1g21499 | 426 | PANTHER | NUDIX HYDROLASE RELATED | 34 | 300 | IPR003293 | GO:0035529(PANTHER)|GO:0047631(PANTHER)|GO:0051287(PANTHER) | |
| Pslu1g21499 | 426 | Pfam | Nudix hydrolase domain | 46 | 124 | IPR040618 | - | |
| Pslu1g21499 | 426 | SUPERFAMILY | Nudix | 104 | 265 | IPR015797 | - | |
| Pslu1g21499 | 426 | Gene3D | - | 43 | 129 | - | - | |
| Pslu1g21499 | 426 | ProSiteProfiles | Nudix hydrolase domain profile. | 136 | 268 | IPR000086 | - | |
| Pslu1g21499 | 426 | CDD | Nudix-Hydrolase-12 | 137 | 268 | - | - | |
| Pslu1g21499 | 426 | PRINTS | Anti-sense to fibroblast growth factor protein GFG signature | 222 | 246 | IPR003293 | - | |
| Pslu1g21499 | 426 | PRINTS | Anti-sense to fibroblast growth factor protein GFG signature | 134 | 152 | IPR003293 | - | |
| Pslu1g21499 | 426 | PRINTS | Anti-sense to fibroblast growth factor protein GFG signature | 96 | 114 | IPR003293 | - | |
| Pslu1g21499 | 426 | FunFam | Nudix hydrolase 8 | 138 | 276 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pslu1g21499 | K26956 | ADP-ribose/NAD+ diphosphatase [EC:3.6.1.13 3.6.1.22] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pslu | Pslu-Chr1:154361544 | Pslu7g10947 | Pslu-Chr7:82525244 | dispersed |