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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pslu1g21502	ATGGCCGATTCCGACAACGAGAACGCCGGCGGCGAGTTATCAGCAAGAGAACAAGACAGATTCCTTCCGATTGCTAACGTCAGCCGGATCATGAAAAAAGCGTTACCGGCGAACGCGAAGATATCAAAAGACGCTAAAGAAACTGTGCAGGAATGTGTATCGGAATTCATTAGTTTCATCACTGGTGAGGCTTCTGATAAGTGTCAACGTGAGAAACGGAAAACGATCAACGGTGACGATTTGTTGTGGGCGATGACGACGTTAGGGTTTGAAGAATACGTTGAGCCGTTGAAAGTTTATTTAGCGAAGTATAGAGAGATGGAAGGGGAGAAAACGACGATTGGAAGACAAGGGGAGAAGGATGGATCGTCCGGTGGTGGTGGCGCCGCCGCCGGCGGTGGTGGGAGTGGTGGCGGTGTGAGTTCAAGTGGTGGGGGTGCTTATAATAACGATGGAGGGATGTATGGAAATACCATGATGATGGGTCGGGTTCATCATCAAATGTATAATTCGGGTTCGGGTTATCATCAAATGAGTTTGGGTATGGGTAGTCCGAAGGGCACTAATTTGGGCAGATCGGGCAGCTTTGGTGGTACTACTGGTGGTGGTGGGAGTGGCATTATAAAGCCTCGGTAG	636	49.37	MADSDNENAGGELSAREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLAKYREMEGEKTTIGRQGEKDGSSGGGGAAAGGGGSGGGVSSSGGGAYNNDGGMYGNTMMMGRVHHQMYNSGSGYHQMSLGMGSPKGTNLGRSGSFGGTTGGGGSGIIKPR	211

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pslu1g21502	211	ProSitePatterns	NF-YB-HAP3 subunit signature.	52	68	IPR003956	GO:0005634(InterPro)\|GO:0006355(InterPro)\|GO:0043565(InterPro)
	Pslu1g21502	211	MobiDBLite	consensus disorder prediction	180	200	-	-
	Pslu1g21502	211	MobiDBLite	consensus disorder prediction	110	140	-	-
	Pslu1g21502	211	PANTHER	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	12	156	IPR027113	GO:0000978(PANTHER)\|GO:0000981(PANTHER)\|GO:0001228(InterPro)\|GO:0006355(InterPro)\|GO:0006357(PANTHER)\|GO:0016602(InterPro)\|GO:0016602(PANTHER)
	Pslu1g21502	211	SUPERFAMILY	Histone-fold	18	126	IPR009072	GO:0046982(InterPro)
	Pslu1g21502	211	Gene3D	Histone, subunit A	11	128	IPR009072	GO:0046982(InterPro)
	Pslu1g21502	211	MobiDBLite	consensus disorder prediction	180	211	-	-
	Pslu1g21502	211	Pfam	Histone-like transcription factor (CBF-NF-Y) and archaeal histone	21	85	IPR003958	-
	Pslu1g21502	211	FunFam	Nuclear transcription factor Y subunit B-3	10	131	-	-
	Pslu1g21502	211	PRINTS	CCAAT-binding transcription factor subunit A signature	68	86	-	-
	Pslu1g21502	211	PRINTS	CCAAT-binding transcription factor subunit A signature	87	105	-	-
	Pslu1g21502	211	PRINTS	CCAAT-binding transcription factor subunit A signature	49	67	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pslu1g21502	K08065	nuclear transcription Y subunit beta

Event-related genes

Select	Gene_1	Gene_2	Event_name
	134949	Pslu1g21502	Pslu5g15227

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Pslu	Pslu-Chr1:154379392	Pslu2g00496	Pslu-Chr2:3227251	dispersed
	Pslu	Pslu-Chr3:122003245	Pslu1g21502	Pslu-Chr1:154379392	transposed
	Pslu	Pslu-Chr4:69444991	Pslu1g21502	Pslu-Chr1:154379392	transposed
	Pslu	Pslu-Chr5:107087926	Pslu1g21502	Pslu-Chr1:154379392	transposed
	Pslu	Pslu-Chr1:154379392	Pslu5g15227	Pslu-Chr5:111395136	wgd

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pslu1g01926	.	51	145	CCAAT-HAP3 Transcription Factor family	AT2G47810	78.947	7.78e-56	170.0
	Pslu1g03115	.	8	173	CCAAT-HAP3 Transcription Factor family	AT2G37060	73.41	6.97e-82	238.0
	Pslu1g05690	.	33	150	CCAAT-HAP3 Transcription Factor family	AT5G47670	77.966	1.06e-65	200.0
	Pslu1g21502	ACH	1	126	CCAAT-HAP3 Transcription Factor family	AT4G14540	86.508	3.91e-75	222.0
	Pslu2g00496	.	1	126	CCAAT-HAP3 Transcription Factor family	AT4G14540	86.047	6.91e-75	221.0
	Pslu3g17085	.	1	97	CCAAT-HAP3 Transcription Factor family	AT1G09030	74.49	1.68e-53	163.0
	Pslu4g00890	ACH	8	156	CCAAT-HAP3 Transcription Factor family	AT2G37060	77.181	3.42e-78	228.0
	Pslu4g02975	.	4	108	CCAAT-HAP3 Transcription Factor family	AT4G14540	78.095	1.09e-53	166.0
	Pslu4g09691	.	19	215	CCAAT-HAP3 Transcription Factor family	AT2G13570	65.174	1.83e-66	201.0
	Pslu5g01691	.	43	159	CCAAT-HAP3 Transcription Factor family	AT2G47810	73.504	4.78e-61	185.0
	Pslu5g14564	.	48	160	CCAAT-HAP3 Transcription Factor family	AT2G47810	60.177	2.69e-48	150.0
	Pslu5g15227	ACH	1	126	CCAAT-HAP3 Transcription Factor family	AT4G14540	87.402	2.93e-77	226.0
	Pslu6g00679	ACH	12	156	CCAAT-HAP3 Transcription Factor family	AT2G37060	73.288	5.17e-75	220.0
	Pslu6g06611	.	1	201	CCAAT-HAP3 Transcription Factor family	AT5G47670	60.099	2.86e-74	223.0
	Pslu7g01308	.	1	173	CCAAT-HAP3 Transcription Factor family	AT2G37060	77.778	1.42e-88	254.0
	Pslu7g09484	.	35	215	CCAAT-HAP3 Transcription Factor family	AT2G13570	58.549	2.92e-62	191.0

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Pslu	CBFD_NFYB_HMF	2.1e-27	CL0012		TF	NF-YB