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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21523 ATGGCCCTTCATTCTATGGGAAGGCAAGGCAGTAACTCGATGGCAGCAAATGGCAGTAGCAGTGGTATATCGTCTATTGCTCTCTTGCAAGAAAGATTCAGGCAGCTGCAGAAAATGAAGGAGAAACGACGAGAGATTGAGCTGTTGAAGTTGTTCCCTGGGCCTGAAACCGCAAATCAATTCAATGAATATGAGCCTAATCCACCAGTGGGTTCGTTGGTACACCCTGAGATAACAACAACAATAGCATGTTATCAGGATTCTCCATCTCTTGGACTAAACTTATACACCAAGCAAGCAGAATCACAAAAATATGCAAAACAGCCACTGTTTGTGGACTTCTGGTCAGTAGATTCAACGTCTGTGAGCACAGTTCATGCTCATGATAAACCAGAAATTGATACCTCCCTTCATCTGTAA 420 43.33 MALHSMGRQGSNSMAANGSSSGISSIALLQERFRQLQKMKEKRREIELLKLFPGPETANQFNEYEPNPPVGSLVHPEITTTIACYQDSPSLGLNLYTKQAESQKYAKQPLFVDFWSVDSTSVSTVHAHDKPEIDTSLHL 139
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21523 139 PANTHER OS03G0593100 PROTEIN 6 139 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21523 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
134954 Pslu1g21523 Pslu5g15240
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:83205462 Pslu1g21523 Pslu-Chr1:154522753 transposed
Pslu Pslu-Chr5:117993915 Pslu1g21523 Pslu-Chr1:154522753 transposed
Pslu Pslu-Chr1:154522753 Pslu5g15240 Pslu-Chr5:111483310 wgd