Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pslu1g21524	ATGGACTTCTCAGAATATTCAAAAATCCTATATGATAGGATCCAACAGATAGAACCTGAAAACGTCTCAAAGATTATCGGGCATCTTCTTATACAGGATAACGGTGAGCGAGAAATGATAAGATTAGCCTATGGCCCAGATAATCTAATACACTCTTTGATCAACGAAGCAAAACTCCACATCAAAAATCGTTCCAATACAACTGCTGGTCAACCAATTTCGCCTCCTCAAGTCAACTCCATCCCCGAAATGCCCCTACACTTCACACCATTCTCTCCTTCACCTCGTCATTCACCATTGACCATCCAAGTCCCGAATCGTTGTTGTGATCCTCATGGTCAACCTGTTGACTATGTTCCTATGGTTCATCCGGCTTCATATCCTGAAGATTATCGTCTTCACAACCATCTTCGTTTCATGTCACTAGAAGACCAGATTGAGACTGTGCACAGCCCGGATTTTTCAGCTAACAATTACTACTCGTCTGAGCCCGCTTTAGGTCCTAGAGCCAATAGGAGGTCTCCAAGTTTACCTGAATTCCCATTCAAAGTTTGCCATTACTTTCTTAAAGGTTTCTGTAGACATGGAAGTAACTGTAGGTATTTGCATCCAACCCCTGAAAGCTTCTCCCAAATCTTTAGCCCGAGTATGAGTGAGGACGATCACGTCTTTTCGCCTGGATCACTTGAACAACTAGAGTTAGAACTCACCGAGCTACTGAAATCGAGAAGAGGGTTCCCTGTGTCGATAGCTTCTTTACCGATGATATATTATGAAAAGTTCGGTAAGACACTTCAGGCGGATGGATATCTCACTGAGAGCCAAAGACATGGCAAAGCTGGTTATAGTTTAACCAAGCTTCTTGCGCGCCTTAAGAGCATCTGTCTCATTGATAGGCCTCATGGACAACATGCAGTTGTGTTGGCTGATGACTTGGTAAAATGTATGGATCATAATGGTGATAGAAATGAACATGGTGGTATTGTAGCGGGTTCCAGGCAGATATATTTGACCTTTCCAGCTGAGAGCACTTTTTCGGAGCGTGATGTTTTCAACTATTTCAACAAATTTGGGCCGGTGCATGACGTGAGAATTCCTTGTCAGCAAAAGAGAATGTTTGGATTTGTGACTTTTGTGTTTGCCGATACAGTTAGGCATATTTTAAACAAAGGGAACCCTCATTTCGTTAGTGGTGCACGTGTTTTGGTCAAACCGTACCGCGAAAAATGCAAGTTTGATGATAGGAAACATGGAGACGCAATTCCGCATCATTTGTACCAAGGTGCTCACTGTCAAGATTCTGATTTTGGGTTGCACTCAAGTCCCAAAACTTTTGATAATTTAAGGTTCTTCAAGAAGCAATTCATTGAAGAACAAGAGCCAACATTCGACTTTGAGAGGCGTTTCTCGGATATGCACTTAACAGCAGATCCCAGTAACCAGTTGCCAAGTTTTGGAACCTCACTTGAAGAATTAATGCTATCAGAAGGCAATGCTCATGCACAACAAATGGACTTCCCTTCAACTGAGCGTTTTAATTATCTTTTAGACGTTTTTAACAATAATGGAGCTAGTGAGGAATATATTAGGCAGATAAATACCAAATACAATGAAGAGAGTAGCCAGGGTGGACTGAATCTTCCAGACAGCCCGTTTGCATCTGCGTTAGGGGGTGAAATATCAACAGTTACATAG	1695	42.12	MDFSEYSKILYDRIQQIEPENVSKIIGHLLIQDNGEREMIRLAYGPDNLIHSLINEAKLHIKNRSNTTAGQPISPPQVNSIPEMPLHFTPFSPSPRHSPLTIQVPNRCCDPHGQPVDYVPMVHPASYPEDYRLHNHLRFMSLEDQIETVHSPDFSANNYYSSEPALGPRANRRSPSLPEFPFKVCHYFLKGFCRHGSNCRYLHPTPESFSQIFSPSMSEDDHVFSPGSLEQLELELTELLKSRRGFPVSIASLPMIYYEKFGKTLQADGYLTESQRHGKAGYSLTKLLARLKSICLIDRPHGQHAVVLADDLVKCMDHNGDRNEHGGIVAGSRQIYLTFPAESTFSERDVFNYFNKFGPVHDVRIPCQQKRMFGFVTFVFADTVRHILNKGNPHFVSGARVLVKPYREKCKFDDRKHGDAIPHHLYQGAHCQDSDFGLHSSPKTFDNLRFFKKQFIEEQEPTFDFERRFSDMHLTADPSNQLPSFGTSLEELMLSEGNAHAQQMDFPSTERFNYLLDVFNNNGASEEYIRQINTKYNEESSQGGLNLPDSPFASALGGEISTVT	564

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pslu1g21524	564	Pfam	RNA recognition motif	345	392	IPR000504	GO:0003723(InterPro)
	Pslu1g21524	564	SUPERFAMILY	RNA-binding domain, RBD	345	420	IPR035979	GO:0003676(InterPro)
	Pslu1g21524	564	Gene3D	-	180	260	-	-
	Pslu1g21524	564	SMART	c3hfinal6	181	205	IPR000571	GO:0046872(InterPro)
	Pslu1g21524	564	ProSiteProfiles	Zinc finger C3H1-type profile.	179	206	IPR000571	GO:0046872(InterPro)
	Pslu1g21524	564	PANTHER	RNA-BINDING (RRM-RBD-RNP MOTIFS)	1	555	-	-
	Pslu1g21524	564	FunFam	zinc finger CCCH domain-containing protein 53-like isoform X2	340	411	-	-
	Pslu1g21524	564	SMART	rrm1-1	334	404	IPR000504	GO:0003723(InterPro)
	Pslu1g21524	564	SUPERFAMILY	CCCH zinc finger	182	204	IPR036855	GO:0046872(InterPro)
	Pslu1g21524	564	ProSiteProfiles	OST-type HTH domain profile.	228	311	IPR025605	-
	Pslu1g21524	564	Gene3D	-	339	411	IPR012677	-
	Pslu1g21524	564	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	333	408	IPR000504	GO:0003723(InterPro)
	Pslu1g21524	564	Pfam	Zinc finger C-x8-C-x5-C-x3-H type (and similar)	183	204	IPR000571	GO:0046872(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pslu1g21524	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	134955	Pslu1g21524	Pslu3g16432

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Pslu	Pslu-Chr1:154545022	Pslu7g07605	Pslu-Chr7:58018691	dispersed
	Pslu	Pslu-Chr2:4596848	Pslu1g21524	Pslu-Chr1:154545022	transposed
	Pslu	Pslu-Chr1:154545022	Pslu3g16432	Pslu-Chr3:117738957	wgd