AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21528 ATGTTACTGTCACCGGGCCACTCACCCCGCCGTCTCTCATCCCCATCACCGTCACCATCAATTTCCGAAACACCGGTCCATGAAACCCCCGGTTCATCCAATTCCATAGCCACCGCCGCCGCCGCATCTCATAGAAACCCTAGAAAACGCTCATCTTCAACCGTCCTCGATGAAGACGCCTACGTTGCAGCAATTGAGAAAATCGTCGAACGGGATTTCTTCCCTGATATTCCTAAGCTCCGAGACCGACTCGATTGGCTGGAAGCTACTCGTTCCGGTGATCCGATGCTTATGCGTGACGCGCAGTTGAAAATTATCGAACGGCGGTCCGGTAAAACCCCGGTTACGGATACGGCAGGTAAAATTCGCACGCCTGGTTCAACGTTTTTCCGTAATACTAGTACACCTTTTGATAGTGATAAAACACCTGGGATCGATACGAAACAAGAGTTCTCAGATGTTCCCAAAGAGGTTATTAGTAGTGATGGTAGTGGGAATGTTAATCCGGATGGTTTAACGCTTGATGCTTTTTTTAGAAAGTATACGAGTGAGGATAACGATAGTTTTTCGAAATTAATTGAGAAGACGAATAGAAAGAAAAGAGAGAGGTATGGATTTTTGTTAGAAGGTGAGAACCGAGGGACAACGGGGTTAATAGAGGACGCGAAAAAGGATAGGATTACGGATGGGTACGGCTCGTCTGATCAGCCTGTAGCTACATTGGATGGTTGGAAATACACTGCGAAGAATTTGTTAATGTATCATCCTGCGGATAGAGGTGAGGTAGCGTTGACTGAAGAGGAGTTAGCGAATAGGTTGAAAGGGATGACAAAGGAGATCAGTAAAACGAATACGAGGTTTCATGGGAAAATGCTGGATTCTAGACCGAAAGAGGAGGATGAAATATCGGTACTTTATAATCCGGTTGCTGGTGGTACTCCGGTTCCCTGGTCTATGTCGGATAGAGATGGAGACAAGGGGAGAAAGTATGATTTGGAGGATTTGAGGAAGACACCGAATCCGTTTTACGTCGAATCTAATAAGAAGGCGGATAATGGGTATAGTTATGTCAAGACGCCCTCCCCTGCACCGGGTGTGGATGAATCTCCATTTATTACATGGGGAGAGATTGAAGGAACGCCGTTGAGATTGGAACCGGAAGATACTCCCATTGATATTGGTGGTAGTGGAAACGGGCCTCAGTTTAATATCCCTCTTCCACCTACAAGAGATGTAAAGGCTCATTCTTTGTCAAGGGAAGCTGCTCGGAAAATTAGGGACCGGTCTAGAATGTTCCAGAAACCACCGCTTCCAGCTAGAGGTGGTAGTGCTAGTCCTGGTGCACGGACTCTATCACCTGCTGCTCAGAAATTTGTTAGGAATGCAATTGCGAAATCTTCTCATTCTGCCACTGTTGATGAGTCATTGCGTGCAAGTTATCGCGGGTCGAGTCCTGGGTTGGCTACACCAAAATTGGGAAGAAGTACATCAAGGTTAGGAAGAGATGGGAGTTTGAGTTCAAGGTCACCTTCGGTTAGGGATGGCTCTAATCCTCCTTGGTAA 1563 46.64 MLLSPGHSPRRLSSPSPSPSISETPVHETPGSSNSIATAAAASHRNPRKRSSSTVLDEDAYVAAIEKIVERDFFPDIPKLRDRLDWLEATRSGDPMLMRDAQLKIIERRSGKTPVTDTAGKIRTPGSTFFRNTSTPFDSDKTPGIDTKQEFSDVPKEVISSDGSGNVNPDGLTLDAFFRKYTSEDNDSFSKLIEKTNRKKRERYGFLLEGENRGTTGLIEDAKKDRITDGYGSSDQPVATLDGWKYTAKNLLMYHPADRGEVALTEEELANRLKGMTKEISKTNTRFHGKMLDSRPKEEDEISVLYNPVAGGTPVPWSMSDRDGDKGRKYDLEDLRKTPNPFYVESNKKADNGYSYVKTPSPAPGVDESPFITWGEIEGTPLRLEPEDTPIDIGGSGNGPQFNIPLPPTRDVKAHSLSREAARKIRDRSRMFQKPPLPARGGSASPGARTLSPAAQKFVRNAIAKSSHSATVDESLRASYRGSSPGLATPKLGRSTSRLGRDGSLSSRSPSVRDGSNPPW 520
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21528 520 MobiDBLite consensus disorder prediction 464 520 - -
Pslu1g21528 520 MobiDBLite consensus disorder prediction 397 450 - -
Pslu1g21528 520 Pfam Nuclear protein Es2 53 458 IPR019148 -
Pslu1g21528 520 MobiDBLite consensus disorder prediction 413 433 - -
Pslu1g21528 520 MobiDBLite consensus disorder prediction 120 142 - -
Pslu1g21528 520 MobiDBLite consensus disorder prediction 9 49 - -
Pslu1g21528 520 PANTHER ES-2 PROTEIN - RELATED 11 510 IPR019148 GO:0071013(PANTHER)
Pslu1g21528 520 MobiDBLite consensus disorder prediction 499 514 - -
Pslu1g21528 520 MobiDBLite consensus disorder prediction 111 148 - -
Pslu1g21528 520 MobiDBLite consensus disorder prediction 464 478 - -
Pslu1g21528 520 MobiDBLite consensus disorder prediction 1 56 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21528 K13118 protein DGCR14