Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pslu1g21541 | ATGGGTAAATTCTTAGCTATTCTTTTTTGCATTCTGGTATCAAATTTAACAGTTTCGTATGGTCAAAGTTGCAACAATTATGCGTTTCGAAGTAACGCAATCTATGCTACATGTGTTACTTTACCTGTTTTAAACTCACATCTTCATTGGAACTACAACAACAACGGCACCGTCGACGTGGCTTTCCGGCACACCGGATCCACCACATCTCAATGGGTTTCATGGGCGCTCAACGTTGGCGGGTCGGGTATGCTTGGTGCTCAAGCACTCGTTGCTATACCGAATTCGAACGGGTCTGTTGAAGCTTACACGTCGGCAGTAACGAGTTACGGAACGAGTTTGCAACGGAGTCCGTTGAGTTTTGATGTTCCGGCGATCAGGGCGGAAAGAGTTAACGGAGATGTGGTGATTTATGCGACGTTGGTGTTGCCACGTGGCACGACAAGTTTTAATCAAGTATGGCAAGTGGGTCCGGTTACTAGTGGAGTTCCGAGTATTCATGCTTTGAATCCGGATAACCGGAATTCTGTTGGAAGGGTGGATTTTACCACCGGTCAGACTACCGCCGGTGGTAATGTTGGTGGTCCACGGCAGCACCGGAAAAACACTCATGGAGTATTGAATGCGGTTAGCTGGGGAGTTTTGATGCCTATTGGAGCTATGGCAGCAAGATATTTAAAGGTGTTTAAAGCAGCTAATCCAGCTTGGTTTTATATCCATGTTGGTTGCCAAACTTCGGCCTATATTGTCGGTGTCGCTGGATGGGCCACTGGACTCAAGCTCGGCAGTGACTCCGTCGGAGTTAAATACAACGCTCACCGGAACATTGGAATTACCCTCTTTGCACTTGCAACACTTCAGGTTTTTGCTCTGCTTTTGCGGCCCAAGCCAGACAACAAATACAGATTCTACTGGAACATCTACCACCAAAGTATTGGATACGCTGTCATCATCTTGAGCATCATCAATGTCTACAAGGGACTCGATATATTGGACCCTGAGAAGAAATGGAAGAATGCATACACCGGCATACTCATTGCTTTGGGTGTTATTGCAGTTTTTTGGGAAGCGTTAACATGGTTCATTGTTTTAAAGCGGAAGAAGGAAGACAAAAGGACACATGCAGGAACTAATGGTTATGGAGCCAATGGGTTCGGTCAGCCCGTGTAG | 1170 | 46.32 | MGKFLAILFCILVSNLTVSYGQSCNNYAFRSNAIYATCVTLPVLNSHLHWNYNNNGTVDVAFRHTGSTTSQWVSWALNVGGSGMLGAQALVAIPNSNGSVEAYTSAVTSYGTSLQRSPLSFDVPAIRAERVNGDVVIYATLVLPRGTTSFNQVWQVGPVTSGVPSIHALNPDNRNSVGRVDFTTGQTTAGGNVGGPRQHRKNTHGVLNAVSWGVLMPIGAMAARYLKVFKAANPAWFYIHVGCQTSAYIVGVAGWATGLKLGSDSVGVKYNAHRNIGITLFALATLQVFALLLRPKPDNKYRFYWNIYHQSIGYAVIILSIINVYKGLDILDPEKKWKNAYTGILIALGVIAVFWEALTWFIVLKRKKEDKRTHAGTNGYGANGFGQPV | 389 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pslu1g21541 | 389 | CDD | DOMON-CIL1-like | 35 | 184 | IPR045265 | - | |
| Pslu1g21541 | 389 | ProSiteProfiles | DOMON domain profile. | 44 | 157 | IPR005018 | - | |
| Pslu1g21541 | 389 | Pfam | Protein of unknown function (DUF568) | 84 | 182 | IPR045265 | - | |
| Pslu1g21541 | 389 | Gene3D | - | 186 | 374 | - | - | |
| Pslu1g21541 | 389 | ProSiteProfiles | Cytochrome b561 domain profile. | 163 | 364 | IPR006593 | - | |
| Pslu1g21541 | 389 | PIRSF | UCP037471 | 1 | 386 | IPR017214 | - | |
| Pslu1g21541 | 389 | CDD | Cyt-b561-FRRS1-like | 175 | 357 | - | - | |
| Pslu1g21541 | 389 | PANTHER | CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN | 7 | 368 | - | - | |
| Pslu1g21541 | 389 | SMART | 561-7 | 203 | 328 | IPR006593 | - | |
| Pslu1g21541 | 389 | FunFam | Cytochrome b561 and DOMON domain-containing protein | 182 | 372 | - | - | |
| Pslu1g21541 | 389 | Pfam | Eukaryotic cytochrome b561 | 204 | 328 | IPR006593 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pslu1g21541 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 134959 | Pslu1g21541 | Pslu5g15260 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pslu | Pslu-Chr1:154642951 | Pslu5g15260 | Pslu-Chr5:111558767 | dispersed | |
| Pslu | Pslu-Chr1:58245736 | Pslu1g21541 | Pslu-Chr1:154642951 | transposed | |
| Pslu | Pslu-Chr1:74356604 | Pslu1g21541 | Pslu-Chr1:154642951 | transposed | |
| Pslu | Pslu-Chr4:29766655 | Pslu1g21541 | Pslu-Chr1:154642951 | transposed | |
| Pslu | Pslu-Chr4:57323851 | Pslu1g21541 | Pslu-Chr1:154642951 | transposed | |
| Pslu | Pslu-Chr5:28480054 | Pslu1g21541 | Pslu-Chr1:154642951 | transposed | |
| Pslu | Pslu-Chr5:31148791 | Pslu1g21541 | Pslu-Chr1:154642951 | transposed | |
| Pslu | Pslu-Chr7:81996674 | Pslu1g21541 | Pslu-Chr1:154642951 | transposed | |
| Pslu | Pslu-Chr1:154642951 | Pslu5g15256 | Pslu-Chr5:111548765 | wgd |