Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pslu1g21607	ATGTCACCAATAAAAATATATCTAATACTCATATTCTCTCTTTTGATTCCACCAAACCCAACAACTGCTGATCAATCATTCATCTCAATTCTCATAAACCAAAACGGTCTTAATTTCGTCAAGAATTTGCTTATAACAAAAGCAATTTCATCTCTCACACCCACTCCAATTTCACAAATTGAAAAGGTTGTTAGAATCCCTGTAATTGGTAAAGTACGTATTGTTCTTTCTGATATTATTATTTACCGGGTCAATATCGGGTCATCGGATGTTAGACCCGGTATATCTGGTGTTTCTATTGTTGGGTCAGGTGTTACTGCTGATATGACTATCAATTGGCATTATTCTTATGGTTCTTGGGTTGGTCCTATTTCGATTTCGGATAGTGGGGCTGCTGCTATTGAGGTTAGTGGCATGGAAGTTGGTTTAGTGCTAGGTTTGGATTATGAAGAAGGATCCATGAAACTTTCTGTTATGGAATGTAATTGTCATATACGTGGCATCTCCATAGACCTAAAAGGAGGAGCATCTTGGCTCTATCAAGGGATTGTGGATGCTTTTAAAGACGAAATCATATCAGCAGTAGAAAAGGCGTTTACCAAGAAACTGAAGAGTGAGGTTTCAGAGCTTGGAATTGTTCTACAAACTCTTCCAAAACATATTCCAGTGAATAATAATGTTTCATTAAATGTTACATTTGTTAACAACCCTTTCTTGAGTGACACTTCATTAGGGTTCGAGATAAATGGGTTATTCGTGGATTCTAAAACCAATATGCTTTCATACCACAACCATTTGCAGCCACCAATCTCTTGTTCAGATCCTTCAAAAATGATTGGAATTGCCCTAGATGAAGCTGTTTTCGAATCTGCCTTCAACTTATACTACAATGCTAAGCACTGGATTGTGGATAAAGTTCCCGAACAATATCTTCTGAACACAGCAGGATGGAAATTTATTATTCCTCAACTCTACAAGAAATACCCAAATGCTGATATGAATTTGAACATCTCTCTGTCTGATCCTCCGCTCGTGCAAATAGCATCAGATAAAATTGCTGCCACAGTCTATGCAGATTTGATCATAGACGTTCTTCAAGGGGAAACAATCCCTGTTGCATGTATCTCATTGGTAATGTCAGGCACAGGTGCAGTTCAAATTATCGGAAATAACCTTGCTGGTCATTTGAAAGTGGATGATTTCACCATGTCCTTAAAATGGAGCAAGATTGGCAACTTGCGCATGTTTCTTATTCAGCCTGTGATATGGACAATGATCGAAACTGTTTTCTTGCCGTATGTGAATGCACGGCTCGGGACAGGGTTCCCTCTGCCTATAATTAGCGGGTTTATGCTCGAAAATGCAGAGATAATATCCTCAGAATCTAGAATCACAGTTTGCAGTGACGTTAGTTATGAGGAATCGTTTGAGAGTCGAATCTACTCTTCATAG	1452	38.57	MSPIKIYLILIFSLLIPPNPTTADQSFISILINQNGLNFVKNLLITKAISSLTPTPISQIEKVVRIPVIGKVRIVLSDIIIYRVNIGSSDVRPGISGVSIVGSGVTADMTINWHYSYGSWVGPISISDSGAAAIEVSGMEVGLVLGLDYEEGSMKLSVMECNCHIRGISIDLKGGASWLYQGIVDAFKDEIISAVEKAFTKKLKSEVSELGIVLQTLPKHIPVNNNVSLNVTFVNNPFLSDTSLGFEINGLFVDSKTNMLSYHNHLQPPISCSDPSKMIGIALDEAVFESAFNLYYNAKHWIVDKVPEQYLLNTAGWKFIIPQLYKKYPNADMNLNISLSDPPLVQIASDKIAATVYADLIIDVLQGETIPVACISLVMSGTGAVQIIGNNLAGHLKVDDFTMSLKWSKIGNLRMFLIQPVIWTMIETVFLPYVNARLGTGFPLPIISGFMLENAEIISSESRITVCSDVSYEESFESRIYSS	483

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pslu1g21607	483	PANTHER	OS06G0309200 PROTEIN	9	476	IPR045897	-
	Pslu1g21607	483	SMART	bpi2-2	273	468	IPR001124	GO:0008289(InterPro)
	Pslu1g21607	483	SUPERFAMILY	Bactericidal permeability-increasing protein, BPI	244	472	IPR017943	GO:0008289(InterPro)
	Pslu1g21607	483	PIRSF	Lipid-binding-protein	4	478	IPR030675	GO:0005615(InterPro)\|GO:0008289(InterPro)
	Pslu1g21607	483	Gene3D	-	30	460	-	-
	Pslu1g21607	483	Pfam	LBP - BPI - CETP family, C-terminal domain	273	472	IPR001124	GO:0008289(InterPro)
	Pslu1g21607	483	SUPERFAMILY	Bactericidal permeability-increasing protein, BPI	30	240	IPR017943	GO:0008289(InterPro)
	Pslu1g21607	483	Gene3D	-	35	215	-	-
	Pslu1g21607	483	Pfam	LBP - BPI - CETP family, N-terminal domain	36	209	IPR017942	GO:0008289(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pslu1g21607	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Pslu	Pslu-Chr2:3484928	Pslu1g21607	Pslu-Chr1:155099132	transposed
	Pslu	Pslu-Chr1:155099132	Pslu5g13319	Pslu-Chr5:98376453	wgd