AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21621 ATGAAGAGATACTTTTATCCACTAACCAGTTTCCAAATTGGGGATTTGCAGTCTTATCTTTCGGATCTTAGTCTTTACTTAGCACCTGACAGCAAGGAGTTTTATGTATTAGTGGATAATAGGCCATGGTTGGAAGACTTGGCCTCACGCCCTGCGCACTTATGGCAACTCATGGTTACCAAGTCGAGAATGTCTCCTTTTGCAAATACGAGAGGTCGAAAGGGGAAGAAAGAGAGTACGCAATTTGTCGACAAGAAGGTTCGTTCTAAGGGTTCAAGTCAGCCGCAAAACTTGAAAAAATGGTTTTCGGTGGTAGATGCTGCAACATTGTCAAGAAAGCAGGCCATGCTTCCTGTAAAGAAACTCCGGAGTTCATTGCTCGCAAATAGCAAATTGCATAGAACATTGTATGGATTTATTGTCTTTAAAGTGGCGTGGAAAGATGTTCGTGGTATCAATTACTTGAATGAGCTTCAGACTGATACTTCTCTTGCAGCAGAAGCTAAATACATGAAAAGATGGGAGTTTGATAGCATATCTCAAGCAGCGAAATGCATAAATACATGGTTTCCAGGGTCAGCACATGAACGATATCTATTAGAAGAGCACCTCAACTCTATGCTAGGAGAGGTGTTCCATGATGCTCCTAAAGAATTTCCAGACTGTCATAGTATGAATCATGATGAAGCAATCTCGAATGCTAGTGCACTTCAGGAGAATGAATCTCCCTACACTCCTCGATGCAATCTTAGTGATAAGCTTGAAAATTTAGAAGACGAAACAAGTATACCACATACACCTCCTCCAAATGGGCCCTATAAGAGAAGAAAATTAATGAGTCCCATAGGAATTAATCTCGAGACCAGTTATTATAGTGAGTTATCGTATGGTGAAAGTGTTTGCACACCAGTGGCATCCACTTATGCAAGTGATTGTGAGGAAACAGCTGAAGCCACTGAGTACAAGGATGTGTTGCTTTTGTTTCGGTTTAATGACCATGACCTCCCGTTTGAATTACAAGAAATAATAGTCTCTGATTTGCGATTACTTACTCTGCTAGAGGCTGGACTTCCATCATGGGTGATTTTCTGTCAATCATATCCTGTATTTTCTCATATTTATCGCCCGTGGATGTGCCCTCTAGCAAGAGCTCTATATGTGGTAATTTCCATTGTTACTGTTGTCATCGGTTTCTATGACCTGTACAAAAACGTTCCTGTTCTGAAGGCAACTGCTTCCCGTTTATGTGGGCCACTTTTTGATTGGATAGAAACGTGGGAGATGGTATCGAGGATCAAGTACTTGGGAACTATGTTGTTTTTGCATAATTCTGAGAAGGCGGTTATGTGGTTCTTGATGATGACACGCACTGTTCGATCATTTGTTTCTATTATCACACAGCCTTTAGCCGGGCCATTTCTGGATTTTCTCGAGGTTCTCTTTCCCGTTTGGAATTTATTCGTTGAGGGGGGACAGTATCTATTCTCGCTCATTTGGATTCTGATGGAAACTTCGTGGGACCTAGTTGAGAATGTTGTCGAAGTCGTGCTTATTCCCGTCGGATTCATCTTGTCGGTTATTTGGATGATTGTATCGACTATTATGTACCCTATTGTCTGGAGCCTTTGGGGAATACTGTATGCTCCAATAGGTCTCATTCTTGGTTTAGCCGATTTTGTTGGATTTGTCTTTAATTACCTGTACGCTTTAGTTGGTGACATATGGCTTATCGTGAGTGGCATCTTCAAGTTAGCTTCAAGTGCTGAGGCAACGGTGAACACTTATGAGGTTTCTATCTGGCGATCTCTTTGGAATGACCTCTTCTCGCAGGTTTTCCGTGCTGTTCGGAGTATTTTACATGGATTCGTTGCATTTTTTACCGCTTGCAATAGACATCGATTAAGCATATATAATCATTTACGAGAGTTCATTCGGACACTTAATCAGCCATCCCGGAGGTCACCACCTTTGAATACTAGCCAGCATCTACAGAGATCTGGGAGTCAGATACCTGCAGAAGCTGGGGAACAAAAGGTGCTGCCCAGGAGAAGTTTTAAGCAGAGTTGA 2067 41.94 MKRYFYPLTSFQIGDLQSYLSDLSLYLAPDSKEFYVLVDNRPWLEDLASRPAHLWQLMVTKSRMSPFANTRGRKGKKESTQFVDKKVRSKGSSQPQNLKKWFSVVDAATLSRKQAMLPVKKLRSSLLANSKLHRTLYGFIVFKVAWKDVRGINYLNELQTDTSLAAEAKYMKRWEFDSISQAAKCINTWFPGSAHERYLLEEHLNSMLGEVFHDAPKEFPDCHSMNHDEAISNASALQENESPYTPRCNLSDKLENLEDETSIPHTPPPNGPYKRRKLMSPIGINLETSYYSELSYGESVCTPVASTYASDCEETAEATEYKDVLLLFRFNDHDLPFELQEIIVSDLRLLTLLEAGLPSWVIFCQSYPVFSHIYRPWMCPLARALYVVISIVTVVIGFYDLYKNVPVLKATASRLCGPLFDWIETWEMVSRIKYLGTMLFLHNSEKAVMWFLMMTRTVRSFVSIITQPLAGPFLDFLEVLFPVWNLFVEGGQYLFSLIWILMETSWDLVENVVEVVLIPVGFILSVIWMIVSTIMYPIVWSLWGILYAPIGLILGLADFVGFVFNYLYALVGDIWLIVSGIFKLASSAEATVNTYEVSIWRSLWNDLFSQVFRAVRSILHGFVAFFTACNRHRLSIYNHLREFIRTLNQPSRRSPPLNTSQHLQRSGSQIPAEAGEQKVLPRRSFKQS 688
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21621 688 MobiDBLite consensus disorder prediction 651 688 - -
Pslu1g21621 688 MobiDBLite consensus disorder prediction 651 671 - -
Pslu1g21621 688 PANTHER OS05G0597400 PROTEIN 3 681 - -
Pslu1g21621 688 MobiDBLite consensus disorder prediction 67 94 - -
Pslu1g21621 688 MobiDBLite consensus disorder prediction 71 85 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21621 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
134965 Pslu1g21621 Pslu3g16523
134966 Pslu1g21621 Pslu5g15302
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:155187901 Pslu3g16523 Pslu-Chr3:118452530 dispersed
Pslu Pslu-Chr1:155187901 Pslu5g15302 Pslu-Chr5:111778105 transposed