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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21656 ATGGACGAGGTGATCACCATCGCCGATGCGGCGTACCGCGCCAGCAAGTCGGCGGCGGTAACGCCAACGTCTTCCGTTCCGATTCCGTCGTACAGTGTTCCGCTGATAACAGCATTCCTTGCTTTTGCAATTGCTCAGTTCCTCAAAGTGATCACCACCTGGTATAAGGAAAAGAAATGGGATCCTAAGAAGATTGTTGGCTCAGGTGGAATGCCATCATCTCATTCATCAACTGTTGTGGCACTTGCAGTATCTATAGGTCTACATGAAGGAGTTGGATCATCGACATTCGCGATTGCTGTTGTCCTAGCTTTTATTGTTATGTACGATGCATCTGGAGTCAGACTTCATGCTGGTCGCCAAGCTGAATTGTTGAACCAGATTGTATGTGAATTTCCACCTGAGCACCCTTTATCCACATCCATACCGCTTCATGATTCTCTTGGGCATACTCCATTCCAGGTGGTTGCAGGGGCCGTGTTAGGATTCATAGTGGCACTCGTGATGAAAGCATCTAACTGA 522 48.08 MDEVITIADAAYRASKSAAVTPTSSVPIPSYSVPLITAFLAFAIAQFLKVITTWYKEKKWDPKKIVGSGGMPSSHSSTVVALAVSIGLHEGVGSSTFAIAVVLAFIVMYDASGVRLHAGRQAELLNQIVCEFPPEHPLSTSIPLHDSLGHTPFQVVAGAVLGFIVALVMKASN 173
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21656 173 CDD PAP2-like 35 168 - -
Pslu1g21656 173 Pfam Divergent PAP2 family 34 165 IPR003832 -
Pslu1g21656 173 PANTHER ACID PHOSPHATASE-VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 14 171 IPR003832 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21656 K09775 uncharacterized protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:30770351 Pslu1g21656 Pslu-Chr1:155460138 dispersed
Pslu Pslu-Chr1:155460138 Pslu2g00560 Pslu-Chr2:3603656 dispersed