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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21660 ATGGCATTAAACAGGGCTGGATCATGTAATCCGGCCGTTGTAAAGATCGGAATTACATTTTTAGGATTGTGTTTGGTGGGTTATTTACTCGGCCCACCCTTATATTGGCATGTTCTTGAAGGATTAGCCGCCGTCCGCCGCTCATCCTCCGCCGTGTCTTGCCCTACTTGCAACTGTGACTGTGATTCTCAACCGCTTCTTACAATTCCTCAAGGGCTAAGCAATGGTTCCTTCACAGATTGTGCAAAGCATGATCCTGAAGTAAGTGGAGACACAGAAAAGAATTTTGCAGAGCTTCTATCCGAGGAATTGAAGCTACGAGAAGCTGAAGCTTTAGAAAGTCAACAACGTGCTGACATGGCACTACTCGAGGCCAAGAAGTTGACATCCCAGTATCAGAAAGAAGCAGATAAGTGCAATTCCGGAATGGAAACTTGTGAAGAAGCTCGTGAAAAAGCTGAAGCAGCTTTACTTGCACAGAAACAACAAAGTGAAATGTGGGAATCAAGAGCCCGGCAAAAAGGCTGGAAGGAAGGCAGCACCAAGTCTGTAAACACCGCTTAG 564 45.92 MALNRAGSCNPAVVKIGITFLGLCLVGYLLGPPLYWHVLEGLAAVRRSSSAVSCPTCNCDCDSQPLLTIPQGLSNGSFTDCAKHDPEVSGDTEKNFAELLSEELKLREAEALESQQRADMALLEAKKLTSQYQKEADKCNSGMETCEEAREKAEAALLAQKQQSEMWESRARQKGWKEGSTKSVNTA 187
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21660 187 Coils Coil 106 126 - -
Pslu1g21660 187 MobiDBLite consensus disorder prediction 157 187 - -
Pslu1g21660 187 PANTHER EXPRESSED PROTEIN 1 184 - -
Pslu1g21660 187 Coils Coil 143 163 - -
Pslu1g21660 187 Pfam Protein of unknown function (DUF1068) 12 179 IPR010471 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21660 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
134977 Pslu1g21660 Pslu3g16541
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:53389292 Pslu1g21660 Pslu-Chr1:155490557 dispersed
Pslu Pslu-Chr1:155490557 Pslu5g16256 Pslu-Chr5:117924216 dispersed
Pslu Pslu-Chr1:155490557 Pslu3g16541 Pslu-Chr3:118567934 wgd