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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21672 ATGATTTACCTTTTCTTCGCGGTTTTATTCCTTGAAATGATTACGATCTTATTACTTCTATTCAAAACCCCACTCCGTAAGCTTTTGATCTTAGGGTTAGATCGTGCGAAACGTGGCAGCGCACCATTGGTTGTTAAATCCGTCGGAACCACCGTTTTTGTAATCATGATGTATAACGTTTACAGTGTAACGGAGATCCAAAGCCGGCCTGCTGACATCATCAACCCCACCGATCAAATTATACTCGCTTACCATATGCTTGAAGCTTCACTCATGGGATTCTCGCTTTTTCTGTCACTAATGATAGACAGACTACATCATTACATAAGAGAGCTTCGCATACTTCGAAAGACCATGGAAACTGCAAAGAAACAAAACCGAGCTGCTGAAGAAACCAAGAACAAAGGTGCAGATGAGGTCAAAGTTTTGAATGATGAAATGTCTAAATTGAAAGCACAGATAAAAAATCTGGAATCTGAATATGCAGCAAAGGAGAAAGAGATTAAATCCGCAGAAGCTAATTCTGTTGCCCTAAAAAATCAATCAGAAGGCTTCCTTCTTGAGTATGACCGTTTACTAGCAGAGAATGAAAATCTTAGAGATCAACTACGCTCCATTGATGAAAGTGTGTCTCATTCCAATGGAAAGAAGAATATGTGA 660 39.39 MIYLFFAVLFLEMITILLLLFKTPLRKLLILGLDRAKRGSAPLVVKSVGTTVFVIMMYNVYSVTEIQSRPADIINPTDQIILAYHMLEASLMGFSLFLSLMIDRLHHYIRELRILRKTMETAKKQNRAAEETKNKGADEVKVLNDEMSKLKAQIKNLESEYAAKEKEIKSAEANSVALKNQSEGFLLEYDRLLAENENLRDQLRSIDESVSHSNGKKNM 219
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21672 219 PANTHER BCR-ASSOCIATED PROTEIN, BAP 1 200 IPR008417 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0006886(InterPro)|GO:0006888(PANTHER)|GO:0016020(InterPro)|GO:0070973(PANTHER)
Pslu1g21672 219 Coils Coil 105 209 - -
Pslu1g21672 219 FunFam B-cell receptor-associated protein 29 136 199 - -
Pslu1g21672 219 Gene3D - 136 199 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21672 K14009 B-cell receptor-associated protein 31
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Event-related genes

Select Gene_1 Gene_2 Event_name
134983 Pslu1g21672 Pslu5g15325
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:155624249 Pslu3g16076 Pslu-Chr3:115693677 dispersed
Pslu Pslu-Chr1:30432834 Pslu1g21672 Pslu-Chr1:155624249 transposed
Pslu Pslu-Chr1:71721605 Pslu1g21672 Pslu-Chr1:155624249 transposed
Pslu Pslu-Chr5:26063120 Pslu1g21672 Pslu-Chr1:155624249 transposed
Pslu Pslu-Chr1:155624249 Pslu5g15325 Pslu-Chr5:111944897 wgd