Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pslu1g21724 | ATGGGGTCTGCCTGTTGTGTTGCTGCTAAAGATAGAACTATAACAGATCGATCTGGTAGTGATGTTATGATGAGGAATGATCGGTATTCACCGTCTTGGAGCTTTCGCTGGGATAATCGAGGGCGTGTGGCAGGTGAAGAGTCATCCATGAATTGCTATTCTGATGGTGCTGGTATGAATGATAGGTTGGACAATAAATCTCATACAACTGTAGAAACTGCAAATGCGACAGAAGGCAGTCCTTTGGAAAGTTCACGAAGCCTCACTTGGCATAAGTCTTCGCTTTCTGAAGAAAATGGAATTCCTCAGTCAGGGCCCGTAAATTTTAAGAATCTTCGCGAGGGGAAGGAGTCAAGGGGAACTACTGTATCTTTGGAACTGTCTCCAGCCAAAATGTCAACACCGACACACTCAGTTTCATCCTTTTCGGCATCTCCTTTATCTTCTTCCCGAAGTCAACTCATGCCACTCTCAAGTTTGACTCCATCAAGATGGCCCCGTCGTTCACCTGGTCACCATCTACTACGTCAAGTGTCTGATAGCCGAATCCGAGGCATGATGTCACCCAACTTTTCAATATCTGAAGAGGGTTCACCTTTCATGTACCCTGGGTGGAGCAATAAATCAAACACGGGGTCTCACGGTGGATCTTCAGATGGTTGGTCTAATAGAGATAGATGGTCTTTTGATAGCGAGTCTCTCAGTTTTAGTCGTGATAGAGTTAGCCGATCTAGTGGCAGGGTTTCTTCTTCTCCAGCCATGGACATTCAGACATGTGGTGTTTGCTCTAAGCTTTTAACTGAGAGATCCTCTTGGAGCAGTCAAAAAATTGTGGCCACCAATGGGCTACCAGCTGTTGCGGTTCTGATATGTGGGCATGTATACCATGCAGAGTGTTTGGAAAATATGACACCCGAGGTCAACAAATATGATCCTGCTTGCCCTATTTGTACTTTGGGGGCAAATAAGGTTCTCAAGCTGTCAGAAAAGGCAATGGGAGAATTGGATTTAAAGGGTAAATTCGGCAAGAAATTAAGGAGTCGGGTGGTGGATGGTGGTGATTTAGTTCTGTTTGATCGTTTTACGAATGGCAGAGGTCCAAAGATGGGTTCAAGTTCAAGCATGAAGAGCTCCACAAGTATAGCCAAGCCGTTTTTAAGGAGACATTTCTCTTTTGGCTACAAACCGAACAGATCTTTGCCGGACAACAGTTCTAAGAAAAAAAGATTTTTCTGGTCAAAATCAAGCAAGGAGTGA | 1257 | 44.55 | MGSACCVAAKDRTITDRSGSDVMMRNDRYSPSWSFRWDNRGRVAGEESSMNCYSDGAGMNDRLDNKSHTTVETANATEGSPLESSRSLTWHKSSLSEENGIPQSGPVNFKNLREGKESRGTTVSLELSPAKMSTPTHSVSSFSASPLSSSRSQLMPLSSLTPSRWPRRSPGHHLLRQVSDSRIRGMMSPNFSISEEGSPFMYPGWSNKSNTGSHGGSSDGWSNRDRWSFDSESLSFSRDRVSRSSGRVSSSPAMDIQTCGVCSKLLTERSSWSSQKIVATNGLPAVAVLICGHVYHAECLENMTPEVNKYDPACPICTLGANKVLKLSEKAMGELDLKGKFGKKLRSRVVDGGDLVLFDRFTNGRGPKMGSSSSMKSSTSIAKPFLRRHFSFGYKPNRSLPDNSSKKKRFFWSKSSKE | 418 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pslu1g21724 | 418 | MobiDBLite | consensus disorder prediction | 69 | 106 | - | - | |
| Pslu1g21724 | 418 | Gene3D | Zinc-RING finger domain, C3HC4 (zinc finger) | 240 | 319 | IPR013083 | - | |
| Pslu1g21724 | 418 | ProSiteProfiles | Zinc finger RING-type profile. | 259 | 318 | IPR001841 | - | |
| Pslu1g21724 | 418 | MobiDBLite | consensus disorder prediction | 121 | 165 | - | - | |
| Pslu1g21724 | 418 | PANTHER | EXPRESSED PROTEIN | 1 | 321 | - | - | |
| Pslu1g21724 | 418 | MobiDBLite | consensus disorder prediction | 395 | 418 | - | - | |
| Pslu1g21724 | 418 | SUPERFAMILY | RING-U-box | 252 | 319 | - | - | |
| Pslu1g21724 | 418 | SMART | ring-2 | 259 | 317 | IPR001841 | - | |
| Pslu1g21724 | 418 | MobiDBLite | consensus disorder prediction | 401 | 418 | - | - | |
| Pslu1g21724 | 418 | MobiDBLite | consensus disorder prediction | 69 | 171 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pslu1g21724 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 134992 | Pslu1g21724 | Pslu5g15158 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pslu | Pslu-Chr1:156042156 | Pslu3g17725 | Pslu-Chr3:126019186 | dispersed | |
| Pslu | Pslu-Chr5:96750169 | Pslu1g21724 | Pslu-Chr1:156042156 | transposed | |
| Pslu | Pslu-Chr1:156042156 | Pslu5g15158 | Pslu-Chr5:110906409 | wgd |