AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21771 ATGGAAGAAAAATTAATACAAAGATTAGAGGCTGCTGTAACGCGGCTGGAATCGATCTCTGTGGGTCGTTCTCAGCCACAAGCTGTCTCACTTGACTCTGCATCAGCCTCATCAGAACCGTCGATTGTTGCATTTGATGATCTGATCACAGAATACGTTGGTAAGATTTCCGCAATTGGAGAGAAAATTGGTGGACAAGTTAAGGATGTTACGAATGTTCTTAGTCAGGCTTTCGCCACTCAGAAGGAGCTTCTCGTTAAGATTAAACAAACTCAGAAACCTGATGCGGGAGGAATGGCCGAATTTCTTAGGCCTTTAAATGAAAAGTTAACAGAAGCAAATAAAATGTCAGAAGGACCACGTTCTGATTTCTTTAACCACTTAAAATCTGCTTCTGAGAGTCTAACTGCTTTAGCATGGATTGCATATACAGGGAAAGATTGCGGAATGAGCATGCCTATTGGACATGTTGAAGACTGTTGGCAGTCGGCCGAATTCTACAGTAACAAGGTTCTTGTAGAATACAAAAATAAAGATGCGGATCACGTGGAATGGGTAAAAGCTCTGAAGGAACTTTATGTACCAGGCTTGAGAGATTTCGTGAAGAGTCACTATCCTTTGGGCCCTGTTTGGAGTGCAACAGGAGCTACCGTATCGGCTCCAGCCAAGTCCTCGAAACAAGGTCCTCCTAGCGCTCCAAATCTCCCACCAGCATCACTTGCAAGCTCAAGTTCTTCATCAGCATCATCATCTTCATCTAAACCAAAGCAAGGAATGGCTGCTGTTTTTCAAGAAATTAGTTCAAAGCCTGTTACTGCTGGATTAAGAAAAGTTACAGATGATATGAAGACTAAAAATCGCACAGATAGAGCAGGCTTTGTGAGTTCTGGTGAAAAAGAAGTCCGCAAGAGTGCACCATCAGCTGCTAAAGTTGGACCTCCAAAGCTCGAACTTGTGATGGGCCGCAAATGGGTTGTTGAGTATCAAATTGGCATTAAGGATCTTTCAATTGATGAGTGTGATCCAAGGCAGACAGTTTATATTTTTGGATGCAAAGATTCAGTTCTACAGATCAAGGGGAAAGTTAACAACATAACTGTTGACAAATGCACAAAAATGGGTGTTGTGTTTACGGACGTCGTTGCTGCTTTTGAGATTGTCAACTGTAATGGCGTTGAGGTGCAATGCCAGGGTGCAGCACCTACAATTTCAATAGACAACACAGCAGGTTGCCAGTTATACTTGAGCAAAGATTCACTCGGCTCTTCTATAACAACTGCTAAGGCGAGCGAAGTTAATGTCATGGTTGCTGCTGAAGATCCTAATGCTGATCTGGCAGAACATGCTTTGCCACAGCAGTACATTCACACGTACGAGGATGGCCACTTTGTTACGACCCCCGTCTCCCACTCTGGAGGGTAA 1422 43.53 MEEKLIQRLEAAVTRLESISVGRSQPQAVSLDSASASSEPSIVAFDDLITEYVGKISAIGEKIGGQVKDVTNVLSQAFATQKELLVKIKQTQKPDAGGMAEFLRPLNEKLTEANKMSEGPRSDFFNHLKSASESLTALAWIAYTGKDCGMSMPIGHVEDCWQSAEFYSNKVLVEYKNKDADHVEWVKALKELYVPGLRDFVKSHYPLGPVWSATGATVSAPAKSSKQGPPSAPNLPPASLASSSSSSASSSSSKPKQGMAAVFQEISSKPVTAGLRKVTDDMKTKNRTDRAGFVSSGEKEVRKSAPSAAKVGPPKLELVMGRKWVVEYQIGIKDLSIDECDPRQTVYIFGCKDSVLQIKGKVNNITVDKCTKMGVVFTDVVAAFEIVNCNGVEVQCQGAAPTISIDNTAGCQLYLSKDSLGSSITTAKASEVNVMVAAEDPNADLAEHALPQQYIHTYEDGHFVTTPVSHSGG 473
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21771 473 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 313 472 IPR036223 -
Pslu1g21771 473 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 2 471 IPR001837 GO:0003779(InterPro)|GO:0003779(PANTHER)|GO:0005737(PANTHER)|GO:0007010(InterPro)|GO:0007015(PANTHER)|GO:0008179(PANTHER)|GO:0019933(PANTHER)
Pslu1g21771 473 Pfam CAP N-terminal conserved motif 3 40 IPR013992 GO:0003779(InterPro)|GO:0007010(InterPro)
Pslu1g21771 473 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Pslu1g21771 473 MobiDBLite consensus disorder prediction 237 255 - -
Pslu1g21771 473 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 41 237 IPR036222 -
Pslu1g21771 473 SMART carp 351 388 IPR006599 -
Pslu1g21771 473 SMART carp 389 426 IPR006599 -
Pslu1g21771 473 MobiDBLite consensus disorder prediction 220 255 - -
Pslu1g21771 473 FunFam Adenylyl cyclase-associated protein 312 472 - -
Pslu1g21771 473 Pfam Adenylate cyclase associated (CAP) C terminal 313 470 IPR013912 GO:0003779(InterPro)|GO:0007010(InterPro)
Pslu1g21771 473 Gene3D - 41 216 IPR036222 -
Pslu1g21771 473 FunFam Adenylyl cyclase-associated protein 41 216 - -
Pslu1g21771 473 Gene3D - 312 472 IPR016098 -
Pslu1g21771 473 Pfam CAP, N-terminal domain 45 207 IPR053950 -
Pslu1g21771 473 ProSiteProfiles C-CAP-cofactor C-like domain profile. 313 450 IPR017901 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21771 K17261 adenylyl cyclase-associated protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
135006 Pslu1g21771 Pslu5g15099
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:156409832 Pslu6g01355 Pslu-Chr6:8910935 dispersed
Pslu Pslu-Chr1:156409832 Pslu5g15099 Pslu-Chr5:110563271 wgd