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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21794 ATGTCGATTTTAGGTGCAAATCTGCCAAGCGAGCTTGGTCTGAAGTTGCTTCTGAGCCCACTTGGTTCAAACATTGTCTTAAAAACAGCGTGTTGTTCTGTGGGAGTTATTTTGCCTGTTTATTCTACTTGTAAAGCGATTGAGTCGAATAATAGAACTGAGCGACAAAAGTGGCTTGTATATTGGGCGGCATATGGTACTTTTAGCGCTGCAGAAATGTTTACTGATAAACTTATATCATGGGTTCCACTTTACCATCATGTTAAATTTGCTTTTCTTGTTTGGCTTCAGCTTCCCACCACGAATGGTGCTAAAGTGATATACATGAGTCACTTACGCCCTTTTCTTTTGAAGCATCAAGCTAACCTCGATCTAATGGTGGCGTTCTTGTACAGCGAAATGGGTAAATTCGTTAGTGCCCACGAAGGAGAAATTCGGTTCATTAAGGCAGCTGGGATGAAGATTCTGATGTCAGCAAAGCAATTTGTCAACGATGGCAGTCAACCCATCCCACCTGTTCCACCACCAGAGGGAAGAGCAATCACAGGCCAAATAGAACAAGTAGAGAGCTCTGACTCTAATGACAATGATGCTGCTGCTGATGATGAAGATGATTATGTAACCGTCCCTGCAACTTAA 639 42.57 MSILGANLPSELGLKLLLSPLGSNIVLKTACCSVGVILPVYSTCKAIESNNRTERQKWLVYWAAYGTFSAAEMFTDKLISWVPLYHHVKFAFLVWLQLPTTNGAKVIYMSHLRPFLLKHQANLDLMVAFLYSEMGKFVSAHEGEIRFIKAAGMKILMSAKQFVNDGSQPIPPVPPPEGRAITGQIEQVESSDSNDNDAAADDEDDYVTVPAT 212
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21794 212 PANTHER HVA22-LIKE PROTEINS 35 128 IPR004345 -
Pslu1g21794 212 Pfam TB2-DP1, HVA22 family 39 115 IPR004345 -
Pslu1g21794 212 MobiDBLite consensus disorder prediction 166 212 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21794 K17279 receptor expression-enhancing protein 5/6
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Event-related genes

Select Gene_1 Gene_2 Event_name
135009 Pslu1g21794 Pslu3g16618
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:22462437 Pslu1g21794 Pslu-Chr1:156551436 dispersed
Pslu Pslu-Chr1:156551436 Pslu3g04628 Pslu-Chr3:32502265 dispersed
Pslu Pslu-Chr1:156551436 Pslu3g16618 Pslu-Chr3:119082894 wgd