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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21801 ATGGGCATATGTGCATCAAGCCACTTCTCAAAACACCAACGAACTTTATTAATCAGTAACGGCCCATCATCATCAGCCACGAAAGTCATCAACTCAATCGACGGAACATTGCAAGAATTCCGTCAACCAATCAAAGCAAGCCACGTGCTCTCCCAACACCCAAGCAACAACCTATTCCTATGCAGTTCCGAAAACATGTTTGTGAACTATCACGTGCCTCACGTGCCGGAAGACGAGGATCTCCAACCGGGTCAGATATACTTTCTTATGCCGGTTTCGAAGTCGTCTAAACCGCTCTCGTTACAAGAGCTTTGTTCGCTGGCGATAAAAGCGAGTTTAGCGATGGAAAAAAATAAGAATAATGAGATGAGGAAGATGAGAAATGGGAATACGGCGTCGTTTAGTGGACGGCGTAAAAGGAATGGGACTGCGAAGGTGGATTTCCAGCTGGCATTGAAGCAACTCAGATGA 471 45.86 MGICASSHFSKHQRTLLISNGPSSSATKVINSIDGTLQEFRQPIKASHVLSQHPSNNLFLCSSENMFVNYHVPHVPEDEDLQPGQIYFLMPVSKSSKPLSLQELCSLAIKASLAMEKNKNNEMRKMRNGNTASFSGRRKRNGTAKVDFQLALKQLR 156
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21801 156 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 24 130 - -
Pslu1g21801 156 Pfam PADRE domain 1 149 IPR025322 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21801 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
135011 Pslu1g21801 Pslu3g16624
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:156586296 Pslu2g02552 Pslu-Chr2:16776908 dispersed
Pslu Pslu-Chr1:156586296 Pslu3g16624 Pslu-Chr3:119135649 wgd
Pslu Pslu-Chr1:156586296 Pslu4g02067 Pslu-Chr4:13554439 wgd