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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21802 ATGGGCATTTGCACCTCATGCTACACCGGTTCCACCGCCACAACCACCGTCAAACTCATCCTTTTCGACGGCCAACTTAGAGAATTCCGGTCACCCGTAAAGGTGTTCACGGTTGTGCAACAACCGTGTTCGTTCATTTGTAACGCCGATGAGATGGACTTCAATGAGTACGTAACGGCCATGAGTCAACAAGATGAACTTCGGCCCGGTCAACTTTACTTCGAGCTACCATCAAGTTGGTCAAACAAGCGGTTGTCGACGGACGATATGGTTTCATTAGCGGTTAAAGCGGGTAAGGCACTTATGGTAAGTGATGGTAAAGTGAGATGTGGATGTTGTGTTAAACGGGTTGACCCGTTGGTGTTTTGTGATGAAAATGAGATGATGAGGTCATCATGTGGTAGGGTTGAAGGTGGTGGTGATATCGGAAACCACCGCGGTGGTGGTGGTAAAAGACGGTTGGTTACAAGGCTTGAACGGATAGTGGAATAA 492 47.97 MGICTSCYTGSTATTTVKLILFDGQLREFRSPVKVFTVVQQPCSFICNADEMDFNEYVTAMSQQDELRPGQLYFELPSSWSNKRLSTDDMVSLAVKAGKALMVSDGKVRCGCCVKRVDPLVFCDENEMMRSSCGRVEGGGDIGNHRGGGGKRRLVTRLERIVE 163
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21802 163 Pfam PADRE domain 1 107 IPR025322 -
Pslu1g21802 163 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 14 115 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21802 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:156592148 Pslu6g02854 Pslu-Chr6:19087171 dispersed
Pslu Pslu-Chr1:156592148 Pslu4g02067 Pslu-Chr4:13554439 transposed