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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21805 ATGAAATACAATGAGATTTCCCATTTTAGCCACCCACAACACCGGCTCAAACAGGGATACACTGAGGTTCCATTTAAGTGTGATGGCTGCAAAGAAGTCGGCATAGGGTCCAACTATAAATGCACAACTTGCAACTACGACTTACATGTCCATTGTGCGCTCCCATCCCCGTCCATCACCCACCCTTTTTACACCAAATGTTCCTTCCAGTTCCTAGCTCGCCCGCCAGGGCCCATAGCCCGTTACTGCAATGCGTGTGAGAAAGCAATTTCAGGATTTCTTTACCATTGTAAGTTGTGTGGATTCGACCTCCACCCATGTTGTGCCAAACTTCCAACTATGTTGGACGATGGCGAGGTGGAGTTGTATTTGTATAGAAAAGTAGGATCCGCTTGCCACAGATGTGGCAGGAAAGGACGAAGTTGGAGTTACAGGTCCACGTGCAAGAAGTACAACTTGCACGTGGCCTGTGTGAAAGAGATGTTGGTGGAAAGTTGGCATGAGATATATTTCGGTAGGGATATGGGCGGGGCGAATGGTAAAATTAGTGATGATTTGTTTGGGCAAAGTAGGAAAATTGAGACAAGAATTCCAAGCTTGAAGGGTACATTGGAAAGTTATCACCATAATCATCAAAGCAAAGGGAAGGTGAAGAAGTGTTGTGAGATGGCAGGTTTGGCTATGCAATTTGTGATATCAGCAGTTCTTGGTGATCCTACTACTCTAATTGCTGGTGTTGTTGGTTCTTTAATGTCTAAATAG 762 44.88 MKYNEISHFSHPQHRLKQGYTEVPFKCDGCKEVGIGSNYKCTTCNYDLHVHCALPSPSITHPFYTKCSFQFLARPPGPIARYCNACEKAISGFLYHCKLCGFDLHPCCAKLPTMLDDGEVELYLYRKVGSACHRCGRKGRSWSYRSTCKKYNLHVACVKEMLVESWHEIYFGRDMGGANGKISDDLFGQSRKIETRIPSLKGTLESYHHNHQSKGKVKKCCEMAGLAMQFVISAVLGDPTTLIAGVVGSLMSK 253
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21805 253 PANTHER CYSTEINE-HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 2 251 - -
Pslu1g21805 253 ProSiteProfiles Zinc finger phorbol-ester-DAG-type profile. 13 67 IPR002219 -
Pslu1g21805 253 Gene3D - 14 66 IPR043145 -
Pslu1g21805 253 SUPERFAMILY Cysteine-rich domain 30 114 IPR046349 -
Pslu1g21805 253 Pfam C1 domain 74 109 IPR004146 -
Pslu1g21805 253 Pfam C1 domain 9 53 IPR004146 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21805 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
135012 Pslu1g21805 Pslu5g15070
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:156613279 Pslu5g15070 Pslu-Chr5:110415150 wgd