AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21811 ATGTTGAAAGGATCTCAAACTTACCTGAAAATGGCAACTGACCCAGCTGCTTCCCAACTACTCGCCTCCGATTTAAACGAAATCGGACTCGCAGCCAAACAATTCGCCGATCACGTCGTCCAGCTCGGCGTTAGCGGCGGGTTCCTTACCACCATCCTTCAATGGTTGGCCTTTGCAGCAGCCGTTTATCTGTTGGTGTTGGATAAAACTAACTGGAGGACCAAGATTCTTACGTCACTATTGGTTCCCTATGTTTACTTGACTTTTCCTAACTGGCTCTTTGGAATTTTGAGGGGAGATATCGGAAAATGGATCACTTTCGTTGGAGTCGTCTTGCGATTGTTTTTCCCTGAGCATTTTAAAGAGTACTTGTTGTTGCCAGGATCTTTGCTCCTATTGGTTGTGGTATCACCCAGTTTCATTGCGGGCTATGTAAGAGACGGGTGGATAGGTGTGATTATTTGCCTAGCAATTGGATGTTATTTGCTTCAAGAACACATTAGAGCGGCCGGTGGTTTCAGGAATGCGTTCACTCATGCTCATGGCATTTCCAACACTATTGGTATTGTGTTGTTGTTCGTGTTCCCCGTGTGGGCTTTGATCGGTTTGATATAA 615 45.53 MLKGSQTYLKMATDPAASQLLASDLNEIGLAAKQFADHVVQLGVSGGFLTTILQWLAFAAAVYLLVLDKTNWRTKILTSLLVPYVYLTFPNWLFGILRGDIGKWITFVGVVLRLFFPEHFKEYLLLPGSLLLLVVVSPSFIAGYVRDGWIGVIICLAIGCYLLQEHIRAAGGFRNAFTHAHGISNTIGIVLLFVFPVWALIGLI 204
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21811 204 Pfam Cold acclimation protein WCOR413 11 192 IPR008892 GO:0016020(InterPro)
Pslu1g21811 204 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 13 200 IPR008892 GO:0016020(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21811 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:156651065 Pslu6g02847 Pslu-Chr6:19056153 dispersed