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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21821 ATGGCTACAGCCTCAGCCACCCTATCTCCAGTCAGCTTCACTGTGGTTGCACCCACCAGGGCTTCTGGTAGAACCACCACAAAGGTGACTTACATCAGGGGTATGAACTCATTTGGTGGGCTTAAAGCTCACAACACTGTGGCTGCATTGGGTCTTCCTGTTTGCACTGAACAACAATTTGCAAACATAGTTGGTTCATTGAAGAAACCATCATCATCAAATGGTGGTGCACTCACTTCCACTTGTAGTGCAGTTGGTGAGATTTTTAAAATTGCTGCTATAATGAATGGGCTTACTCTTATTGGAGTTGCAGTTGGTTTTGTTCTTCTACGAATCGAAGCGTCTGTTGAAGAAGCAGAGTAA 363 44.63 MATASATLSPVSFTVVAPTRASGRTTTKVTYIRGMNSFGGLKAHNTVAALGLPVCTEQQFANIVGSLKKPSSSNGGALTSTCSAVGEIFKIAAIMNGLTLIGVAVGFVLLRIEASVEEAE 120
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21821 120 Hamap Cytochrome b6-f complex subunit 7 [petM]. 84 116 IPR012595 GO:0009512(InterPro)
Pslu1g21821 120 SUPERFAMILY PetM subunit of the cytochrome b6f complex 85 117 - -
Pslu1g21821 120 Pfam PetM family of cytochrome b6f complex subunit 7 86 113 IPR012595 GO:0009512(InterPro)
Pslu1g21821 120 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 1 120 IPR053333 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21821 - -