AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21836 ATGGCACCTGCAAAACCTACTGGCCGTGCGATCTCGCAACAAGCATTCGATGAAATGGTTAAAGAAAACATAGACGATTTAGGGATGGAACCATCTGAAGCCTTAACTGACGCAATCGAAACCCTAACTCTTCAAGGCGTAGATCTCTCCGGTATCGTTACAACTACACTTCCTGGAGAATCGAATCCGGTGATTGAATCTATTAATCGAATCAAACGATTACAGGATTCCGATTGGACAGATGAATCAGTCGTAAATGAAGCGATAGGAATGTTCGATAATTTGACTACGATTTCTCGTGTTGATGGATCCGGAAATGCTGCAATTGCTACGAGAAACGGAGGTGTAGAATTTATGTGTTCAATTTGTTCGAAACTTAGGGACTCTGGCCGTGATTTAGCACTTGTATCTGCTTTAAACACATTAGCTGCAATTCTTCACGATCTTCAAAGTACAGAAACTTTTCGGCAGAGTGGAGGACCTAAAATGGTGGTTGGTATATTAAGTGATGGAACTGAAAATATGAATGTTATTAACAGTTGTTTTGCTGTTGTTGCTGCGGCTGCAACTGGTAATGAGGTTCTCAAGGAATCTTTTGTGGAGTTACATATAGATGAGTTGATAGTTACAATTATGAAGAAGCATAGTAAAGAAAGCATCTCAAGTTTATATGATGCTATTCGAGTGCTTTTGTCCGCTGATGATAACCGAGTACTGGCTTCACAAGTTTATGGCTATGCTCGGCAATTTGCAAAAGTTGGAATAGCTGATGTTCTTGCAAAGTCACTTGATGGTGGGATTAGCTCACCAAGTTTGGTATCAGCAACTATTGCACTAAAGGCCGTTGCAGTGAATGATGAAATATGCAAATCTGTTGCTGAAAATGGTGGTATTGATTCATTGCTCATTTGTATTGATGACTCGGGTATACAGGGGAACAGTATTGTGGCTAAAGCTTGCTGCTCTTTGTTATCCAAATTGGCAGGAAGTGACTACAACAAGAGTGCCATTGTTGAAAAGGGAGGTTTAAATAGACTCATCACACTTTGTAGCAGACTTGCTGATGATCCATCTGTCCTCCAAGAGGCGATGACTATCATATGTACTCTGTGCCTGCGATCACCTGGAAATGCAGGCTTAGCTATGGAAGCTGGAGCAGGAGAGCTTGCTATCCAATCTATGAAAAATTTCCCTCAAGCATTTCAGCTGCAGAAAAATGCATGTCTCATGATCCGTAATCTAGTTGTCAGAAATCCTGAAAACAGGTCTGTTTTGTTGAGTAATGGTATTGAGAAGATAATAAGGAACACCAAGGATAACCACAAAAGTTGCAGGGATGCAGCCACTGATGCACTTAGAGATTTGGGGCTTGAAAATTACAACTTGTAA 1389 40.82 MAPAKPTGRAISQQAFDEMVKENIDDLGMEPSEALTDAIETLTLQGVDLSGIVTTTLPGESNPVIESINRIKRLQDSDWTDESVVNEAIGMFDNLTTISRVDGSGNAAIATRNGGVEFMCSICSKLRDSGRDLALVSALNTLAAILHDLQSTETFRQSGGPKMVVGILSDGTENMNVINSCFAVVAAAATGNEVLKESFVELHIDELIVTIMKKHSKESISSLYDAIRVLLSADDNRVLASQVYGYARQFAKVGIADVLAKSLDGGISSPSLVSATIALKAVAVNDEICKSVAENGGIDSLLICIDDSGIQGNSIVAKACCSLLSKLAGSDYNKSAIVEKGGLNRLITLCSRLADDPSVLQEAMTIICTLCLRSPGNAGLAMEAGAGELAIQSMKNFPQAFQLQKNACLMIRNLVVRNPENRSVLLSNGIEKIIRNTKDNHKSCRDAATDALRDLGLENYNL 462
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21836 462 SUPERFAMILY ARM repeat 72 455 IPR016024 -
Pslu1g21836 462 SMART arm-5 374 416 IPR000225 GO:0005515(InterPro)
Pslu1g21836 462 SMART arm-5 330 372 IPR000225 GO:0005515(InterPro)
Pslu1g21836 462 SMART arm-5 285 329 IPR000225 GO:0005515(InterPro)
Pslu1g21836 462 SMART arm-5 418 457 IPR000225 GO:0005515(InterPro)
Pslu1g21836 462 PANTHER UNCHARACTERIZED 5 456 - -
Pslu1g21836 462 Gene3D - 61 462 IPR011989 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21836 K24166 armadillo repeat-containing protein 6