AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21871 ATGTTGACTACAGCAGGAGGTACCTTTTACTGGTTTCGAAATGAAATTGAATCCAAATTCGAAGGAATCGTTGTGATTTTCGCATGGGGTTCGGTTCAGGATTCTCAATTGAAGAGTTATGTAAATCTGTATTCTTCAATTGGGTGGAATTCCCTTGTTGTTCAATCCGATTTCCTCAATCCATTTTTTCCTGAGAGAGCTACGTCACTTGCATTTTCCGTCCTCAATGAGCTTTTAGAGGAGTTGAGGTCTAAACCATACCCTTTAGTCCTTGCATCCTTTTCTGGTGGCGCACAGGCTTGCATGTATAAAGTTTTTCAGATCATTGAAGGAACATGTGAAGCACATCTTAATCTGGATGATAGTCGGTTAATCATGACTTGCATCTCTGGTCAAATGTATGACTCTGGTCCGGTTAATGTGACTGGTGATTTGGGTGCGCGGTTTGCCCTACACTCCTCCATTCGCAGTGTACCCGGTTCATCAAAGTTGGTGTCATTGGTTGCCAAAGGTGTAACGTCCGGTCTGGATGCCCTGTTCCTTACTAAATTTGGTTCCCAACGGTCTGAATACTGGCAAACACTATACTCCTCTGTTGGTTTGGAGGCTCCATTTCTCATACTGTGTTCAGAAAATGATGATCTTGCTCCATATCCCGTTATATGTTCATTTGCTAAACAAGTAAGAGGATTAGGAGGACATGTTCGACTTATCGGATGGAAGGACTCACCTCACGTAGGTCACTACAAGCACGATCCAATCCAATACAGAGCAGCTGTAACTGAGTTTCTTGAGCATTCTGTCTCAATATTCAACCAAAAGCTGCAAACACTTGCTGAAAGAAGTGGTATGGAAGGTATGCACGACAAAATATGTGAATTAATCTGCGACCTTCAAAATGCAGCAGTTGACTCAAACCAAAGCCTAAGAAGAGTAGCCATAGGACCAAACGACCACTTTTTCTTGCCAAGTTCAGCCGAGTATCAAAATGATAAAGAATCTGGATCATTACAAGATGAACAAAAAGAAAGAAGAGCGGTCCATTTAGCAAGTCCTCCAAGCCTAAGTCCTCACAGTGTTCTTGGTCAAGTTCTTTTCGATGTTTGTGTGCCCAAAAACATCGAAGGTTGGGATATCAAATTTGAAAACAGGCAGCCATTTGCATCTCCTGCTCGTAAGCGACCATCTTTAAATGCATTAAAACGTATGAGGCGATCAAGATTATAA 1227 42.05 MLTTAGGTFYWFRNEIESKFEGIVVIFAWGSVQDSQLKSYVNLYSSIGWNSLVVQSDFLNPFFPERATSLAFSVLNELLEELRSKPYPLVLASFSGGAQACMYKVFQIIEGTCEAHLNLDDSRLIMTCISGQMYDSGPVNVTGDLGARFALHSSIRSVPGSSKLVSLVAKGVTSGLDALFLTKFGSQRSEYWQTLYSSVGLEAPFLILCSENDDLAPYPVICSFAKQVRGLGGHVRLIGWKDSPHVGHYKHDPIQYRAAVTEFLEHSVSIFNQKLQTLAERSGMEGMHDKICELICDLQNAAVDSNQSLRRVAIGPNDHFFLPSSAEYQNDKESGSLQDEQKERRAVHLASPPSLSPHSVLGQVLFDVCVPKNIEGWDIKFENRQPFASPARKRPSLNALKRMRRSRL 408
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21871 408 Pfam Eukaryotic protein of unknown function (DUF829) 129 377 IPR008547 -
Pslu1g21871 408 MobiDBLite consensus disorder prediction 333 347 - -
Pslu1g21871 408 SUPERFAMILY alpha-beta-Hydrolases 193 265 IPR029058 -
Pslu1g21871 408 MobiDBLite consensus disorder prediction 329 352 - -
Pslu1g21871 408 PANTHER UNCHARACTERIZED 6 272 IPR008547 -
Pslu1g21871 408 SUPERFAMILY alpha-beta-Hydrolases 12 264 IPR029058 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21871 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:157012734 Pslu3g02490 Pslu-Chr3:16611849 dispersed