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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu1g21896 ATGGCAGATTCCAAACAAGTACCTCAACTTCTATTCAAACAACGATCGTGGTCTCCGGACATTGACCGTGACATCGAATGGCAAAAACTTAAAATCAAACAACTACGTCGTTACCATCACCACCGACGTAGCAAGAGCATCAACGTTGATCCTGAAGTCGACGTCACTGATGACGATGTTAAGGAGCTTAAAGCGTGTTTTGATTTAGGTTTTGGTTTTGATCTTGATTCTTGTAACGTGTTGGATTCGAAACTTGCACATGCTTTTCCTGCTCTAGAGCTGTATGCGGCTGTTACCAGACGGTACAACACTAGATTTCTATCACGCTCTTCGTCATTAAGTTCTGACTCTTCTGCAAGTTCATCAAGTGTTACGACTTCAATCATTGATCTAGATGATGACCCGGTGAAGGTGAAGACGAAATTGAAACAATGGGCTCAATTGGTTTCGTATTCGATTTTAGAAACTTCTTCACTGAAAGTAACAAAAATGTTGGAGAATAAAAATAATTGA 513 40.16 MADSKQVPQLLFKQRSWSPDIDRDIEWQKLKIKQLRRYHHHRRSKSINVDPEVDVTDDDVKELKACFDLGFGFDLDSCNVLDSKLAHAFPALELYAAVTRRYNTRFLSRSSSLSSDSSASSSSVTTSIIDLDDDPVKVKTKLKQWAQLVSYSILETSSLKVTKMLENKNN 170
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu1g21896 170 Pfam Protein of unknown function (DUF1685) 55 115 IPR012881 -
Pslu1g21896 170 PANTHER OSJNBA0071G03.3 PROTEIN 9 153 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu1g21896 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
135030 Pslu1g21896 Pslu3g16663
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr1:157135103 Pslu2g02661 Pslu-Chr2:17475001 dispersed
Pslu Pslu-Chr3:119419278 Pslu1g21896 Pslu-Chr1:157135103 transposed
Pslu Pslu-Chr1:157135103 Pslu4g02111 Pslu-Chr4:13780156 wgd