AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu2g13579 ATGGAGCTGCAAAATCAAGTAGCGCAGGCTGTTCACGTACTGAATCACGATACGCAATCGTGTAATCGCGTATCTGCTAATCAGTGGTTGGTTCAATTTCAACAAACAGATGCTGCTTGGGAGATCACTACTTCAATTTTGACATCTGATCGTTTATCTTATGTTTCGGATTTCGAAGTTGAGTTTTTTGCAGCTCAGCTTCTCAAACGAAAGATCCAAAATGAAGGACATTGTCTTCAGTTGGAGGCAAAGGAGTCCCTTGTAAAAGCCCTCCTTCTGGCTGCTAAGAGATTTAGTTTAGGCCCATCTCAGCTTTTAACACAAATCTGTCTAGCTCTATCCACACTGATACTTCATACTGTGGAGTACTACAAGCCGATTGAGAAGCTCTTTTACAGTCTTCAAAATCTGCAAGGTCAGGATGATGGCAATGTTGTTGTTTTGGAAATGTTAACAGTCTTACCAGAAGTTGTTGATGATGAATGCGCTAATTATAGAACCAAGTCAGGCCAAAGAATTGACCATCGCCCGGAGCTACTCTCACATACATCGGCAGTGTTGGAGTTCTTAAAGCAGCAATCCGAGGAAAGTTTTGATAATGTCATACAACTACATGAAAGGAGCAGAAAGATCCTTCGTTGTTTGTTAAGTTGGGTTCGGGCAGGATGCTTCTCAGAAATTTTACCAGTCTCATTACTAGCCCATCCCCTTCTTAACTCTGTTTTCAACTCTTTGCAGGTTCCATCCTCATTTGATCTGGCTATTGAGGTTTTAATTGAGCTTGTTGGTCGGCATGAGGGACTGCCACAAGCTCTTATTTGCAAAATAGGATTTCTTAAAGATGTTCTTCTTCAAGCATTCAGTGGTGGAGATGAGAAAGTAATTAGTGGTCTTGCATGCTTGATGTCAGAGATTGGTCAGGCTGCCCCAAGTTTGATCACAGAAGCCAACTCAGAAGCACTTATATTGGTGGATGCACTTTTGAGGTGTGTATCGTTTCCAAGTCAAGATTGGGAGATTGCAGACTCAACCCTGCAGTTTTGGTGTAGTCTTGCTAGCAATATCGTTCGAATGGATGTTGGGATCACAGAAACTAGTAAACATGTCAAAGATGTATTTTCCCCAGTATTTTCAGCATTGCTAGATGCTCTTTTAACGCGTTCTCAGGTGGATGATTCAACTTATAAAGGTGAGACTGTAAGTAGAGACTTACCAGATGGGCTTGCTCAATTTAGGTCAAATTTAGTGGAGCTTTTGGTGGACATTTGCCAGCTTTTGAAGTCTGCTGTGTTTTTGCAAAAGATATTTTTTGGTGGTTGGATGTCTTCAAACGTACAAATTCCTTGGAAGGAGGTGGAAGCCAGAATATCTGCTCTTAACGTGGTTGCTGATGTAGTACTGCATGAAGGCCAAACATTTGATTTCTCCATGATCTTGCATTTGGTGACAATTTTGTGTGATAGGGCCTCATACGAACCAAAAGGCTTTATGTGTATTGTACATAGATCACTTGCAGATGTTATTGGTTCATATTCGAAGTGGATGTCTTCTTACATAACTAATGCCAGACCATTGCTCGTATTTTTTGCAGCTGGTATGTCAGAACCATTGTGTTCACATGCATGTTCAACTGCCTTCAGAAAGGTCTGTGAAGATGCTACTGAAGTTCTGCTCGAACCTGCAAGCTTAGAAATGTTGATGTGGATTGGGGAGGATTTGGAGAAGAAGCATCTACCTCTAGAAGATGAGGAAGATGTTATTGGGGCTGTTACTCTGATACTTGCATGCCTTCCTAACTTGGAATTAAGAAACAGTCTGTTGCTTAAGCTGCTTTCTCCTAGCTTTGAATCTATTGGCAAACTTATTGATCGGGATCAAGTTAATTCTTTGAGGCAACTACCAGCTGCTTATACTCATCTTGTGAGTTCTGCAGTGAGGGGTTTTTTCAGGATAGGAACTGTTTTCAGTCATCTTGTAATGACACCCTCTACATGTCATGATATAGATAGTTCCGTAATAGTCCTTCTTAGAAGTTTTTGGCCTCTGCTTGAGAAAATCTTTCAGTCCGAGCACATTGAGAATGCAAGTTTATCCATGGCAGCATGCAGGGCTCTCTCACTGGCAATCAAGTCTGCAGGCCATCATTTTGTGATACTGTTGCCCAACGTTTTAGATTATTTATCAACGAATTTTGTGTCATTTCAAACTCATGAGTGCTACATTAGAACAGCTTCTGTTGTCGTGGAAGAATTTGGTAATAAGGAGGAATATGGACAGCTATTTATCAGTACACTTGAAAGATTTACAAATGCATCTTCAGTAATGGCTTTAAATTCTTCATATGTATGTGATCAAGAGCCCGATCTTGTGGAGGCTTATTGTAGTTTCACATCAATCTTTCTTCGCAACTCTTCAAAGGAAGTAGTGGCTTCTTCTGGGTCTCTTTTGGAAGTTTCCTTTCAAAAAGCAGCTATATGCTGTACAGCTATGCATCGTGGAGCAGCACTTGCAGCAATGTCGTATATGTCTTGTTTTCTAGAGCTCTGTCTGACTTCACTACTGGAATCAGTGACATGTAACTCTGAATCATTAGTTACATCCATGACAGTTCATGTTATATCTCACTGTGGCGAGGGCCTTGTATCAAATGTGGTTTATGCTTTACTTGGTGTTTCAGCAATGTCAAGGGTTCACAAATCTGCAACTATCTTGCAAGAATTGGCGGCTGTATGCAGCTTTAGCGAGAAAACGACGTGGAAGTCTGTTCTCTGTTGGGATTCTTTACATGGATGGCTACATGCTGCGGTGCGGAGTCTACCTGTTGAGTACTTAAGGCAGGGGGAAGCAGAATCTTTAGCACCTGTATGGCTAAAGGCCCTGGGTGATGCAGCAATTGATTATGTTGAAAGTAGAACGAGTGATGGAGAGAGGAATCATAAACATATGCGGGGAAAGGGTGGTAGGATACTCAAGTATTTATTTAGGGAATTTGTTGATAGTCATCGTAACATTGCTACATGA 3021 41.24 MELQNQVAQAVHVLNHDTQSCNRVSANQWLVQFQQTDAAWEITTSILTSDRLSYVSDFEVEFFAAQLLKRKIQNEGHCLQLEAKESLVKALLLAAKRFSLGPSQLLTQICLALSTLILHTVEYYKPIEKLFYSLQNLQGQDDGNVVVLEMLTVLPEVVDDECANYRTKSGQRIDHRPELLSHTSAVLEFLKQQSEESFDNVIQLHERSRKILRCLLSWVRAGCFSEILPVSLLAHPLLNSVFNSLQVPSSFDLAIEVLIELVGRHEGLPQALICKIGFLKDVLLQAFSGGDEKVISGLACLMSEIGQAAPSLITEANSEALILVDALLRCVSFPSQDWEIADSTLQFWCSLASNIVRMDVGITETSKHVKDVFSPVFSALLDALLTRSQVDDSTYKGETVSRDLPDGLAQFRSNLVELLVDICQLLKSAVFLQKIFFGGWMSSNVQIPWKEVEARISALNVVADVVLHEGQTFDFSMILHLVTILCDRASYEPKGFMCIVHRSLADVIGSYSKWMSSYITNARPLLVFFAAGMSEPLCSHACSTAFRKVCEDATEVLLEPASLEMLMWIGEDLEKKHLPLEDEEDVIGAVTLILACLPNLELRNSLLLKLLSPSFESIGKLIDRDQVNSLRQLPAAYTHLVSSAVRGFFRIGTVFSHLVMTPSTCHDIDSSVIVLLRSFWPLLEKIFQSEHIENASLSMAACRALSLAIKSAGHHFVILLPNVLDYLSTNFVSFQTHECYIRTASVVVEEFGNKEEYGQLFISTLERFTNASSVMALNSSYVCDQEPDLVEAYCSFTSIFLRNSSKEVVASSGSLLEVSFQKAAICCTAMHRGAALAAMSYMSCFLELCLTSLLESVTCNSESLVTSMTVHVISHCGEGLVSNVVYALLGVSAMSRVHKSATILQELAAVCSFSEKTTWKSVLCWDSLHGWLHAAVRSLPVEYLRQGEAESLAPVWLKALGDAAIDYVESRTSDGERNHKHMRGKGGRILKYLFREFVDSHRNIAT 1006
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu2g13579 1006 Gene3D - 2 955 IPR011989 -
Pslu2g13579 1006 Pfam Importin-beta N-terminal domain 26 92 IPR001494 GO:0006886(InterPro)|GO:0031267(InterPro)
Pslu2g13579 1006 Pfam Exportin 1-like protein 103 258 IPR013598 -
Pslu2g13579 1006 SUPERFAMILY ARM repeat 1 886 IPR016024 -
Pslu2g13579 1006 PANTHER TRANSPORTIN 3 AND IMPORTIN 13 5 1002 IPR051345 GO:0005737(PANTHER)|GO:0006606(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu2g13579 K15436 transportin-3