AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu2g13591 ATGGCGGCGGATCAGCTCAATAAGCATTCTAAAGTCAGCAATGTCATTGACTGTTCTTGGGAGATGCAGAAATCGAAAAAGAAGAAATCCTCTCATCATGATTTAAATACCAGATCAAGTATATCTCTCGAGTGGGATGGAAAGAAGGAACAAGTTGTTTCTAAGAAGGAGCAGATAAGCATTGCATGCAGAGATCTGACTCCGTTTATTCCTCTTGTTTCAAATTACCAAAGGGTCCTGGGTGATGTCTTTCCAGCTCCTCCTGAATTGTTTGACCTGGAAAACTTGGCAGGCTTGCTATCTTATGAGGTTTGGGAAACTCATTTGTCTCTTCAAGAAAGAGAGTTTTTGACCCAGTTTCTTCCTGAAGGTTCTGATCCGCATAAAGCTGTTTATGAATTGTTAGATGGGAATAATTTATGCTTTGGAAATTCATTTTCAAAATGGGGTGCTTCAGTTTGTTCCGGTGGGTGTCACCCTGATGCTGTTCTCCGTCAAGAACAGCGTAACAAGGCTAACAAAGTATCATATTACTCAGAATTGCATAAGTACCATACTAAAATGATAGGGAGTTTGCAATTGTGGAAGGAAAGATGGGCAAGCTGTGTGGATCCAGAAAATGAATTTATGCAGAAGATACTAAGTTCTAGAGAGGACAAAAGTGTCTCTCTACATGAGAACGGGATGCGATCTGGTCCAGAAGAACTGAATGCAACATCTGGTTCTTGTTCATGGGATGCTGATGATAAGTTATATAGTAGTGATAGCCCAAATTTAGCAATCACAAATGCAGAAACCTTAATGAGTATGCGGAACAATTTTTATGATTCCTCTGGTGGGAGATCGGTAGCAAGACCTGAAAAAGGAGAGAAATTACGCCGACTCAATGTAGAAAGTGGTGATGGTGCCAGATATATGTCGTATATCAAGGTTAGCAAGGAACAGCATGAACGAGTTAAAAGCAGCATGAGACACTCTAATACCAGCATCCAGCCAAGATCTCTTAATCATGTATTAGGCAATCTTGACGGCTTCTGCGTTCAGCCGTATGAAGTGTTTGAGGAAGAAGAGAGACAGAAGCTGCGTGACCACTGGTTGCATTTGGCAAAGAAGGATCTTCATGTTGGCTTTGAAAATTGGAAAAGTTGGCATTCTGCTAAGTGGCAAGTGAAAAATTCATTAATTAAAGAATTGGAAGGTAAATGGAAGTCAAATGATCAGCCAGATCCAATTTTGAACAATCAGTATGAGGAAAATTCGGGTTTTATCTGTTTGGAACAAAATGATGATCCAATATTCGGGTCAGAGGAGGATTTAAATGCAGAAAATCATGTAACCAGCATGCAAATTGAACATAGAGATGAGTCAGGTCATGACTCTGCTCACAATCAGCATCTGGTACATAATGATAGTCAAAACTTCTGCCCCATGGCCATGGAAGCTAATAATAATGAAGTATTGACAGAATCGAATGCTTTTCCTTCTAGTTTAGTTGAATATCCCGAAAGTATAAATCATGTAGACACTCCTGTTGATGAACAGTTTCCTCTTCCATCTGCTGCCAGTGAACTATGGCCTCCAGTTAGCCTACCACCAAGTGTGTACTATCATCAACCTACATCTGTAAGCCATGAGTACTCTTCTATCAGTGAATTGTCACTTAGGCAAGGCCAATCAAATTTTTTGCACAGACGATCCGATGGTGGAGATTCTTTCTTTAATCCATATGCCAATCAAGATCGTAACGAGTTACTACTGAATTCTTTTTTAAAAGATCCTGTGACCGCTCCTTATCTTCATGAACAGAAGCTATCTAGGCTCGCTTTTCGCCCGATCGGAAGTGATGCAATGCTTGGAACCCCTCAATTTCCGAGAAATTTATGCTCATCAATGCCATTGGATCCAAGTAATCATAGCATTGAAGAAAACATATTTGCAGATGGAGGTGGTAGGTTCTCGATTCCAAGGCAAGAACACTTGTTGCCACTCAATCATGTTCAAGATTGGCCTGTAAATGGTGTTAATCTGCCAATGCCAGCATCATCATCCCATCATCAAATAAATCAAAATTGGTTTTCTAATGATGAGGTGGTGCGTGATGGGTGGTCAGGTGGGGTAGCACCACACCAGGACATTCGGAATAGTGGTCAGGTGGCTGATGAGAGCTTATATGATGTTTTATCTCAGTGTAATGGGCTGCGTTCAGAGGTTCATCTCGGTTCAACTGGTGCAGTTGAACAGTTTGTGCAGTCTGGTAACTATGTCAGGGTGGGACGTGCACCCGTTTTGCCTATGATCACTAATGTTGTGCCGACTGGTCCCAATAGAGGTTTGGGTCTCAACTACATGAATGGCAATGAAGCTCAATCAGGATGGATGAACTTGCCCCGCTCGTTGCAGGATACCGCAGGGAAATCATTTCCAAGGGTATGGAATGATAAAGATTTAGGACGATAG 2457 41.51 MAADQLNKHSKVSNVIDCSWEMQKSKKKKSSHHDLNTRSSISLEWDGKKEQVVSKKEQISIACRDLTPFIPLVSNYQRVLGDVFPAPPELFDLENLAGLLSYEVWETHLSLQEREFLTQFLPEGSDPHKAVYELLDGNNLCFGNSFSKWGASVCSGGCHPDAVLRQEQRNKANKVSYYSELHKYHTKMIGSLQLWKERWASCVDPENEFMQKILSSREDKSVSLHENGMRSGPEELNATSGSCSWDADDKLYSSDSPNLAITNAETLMSMRNNFYDSSGGRSVARPEKGEKLRRLNVESGDGARYMSYIKVSKEQHERVKSSMRHSNTSIQPRSLNHVLGNLDGFCVQPYEVFEEEERQKLRDHWLHLAKKDLHVGFENWKSWHSAKWQVKNSLIKELEGKWKSNDQPDPILNNQYEENSGFICLEQNDDPIFGSEEDLNAENHVTSMQIEHRDESGHDSAHNQHLVHNDSQNFCPMAMEANNNEVLTESNAFPSSLVEYPESINHVDTPVDEQFPLPSAASELWPPVSLPPSVYYHQPTSVSHEYSSISELSLRQGQSNFLHRRSDGGDSFFNPYANQDRNELLLNSFLKDPVTAPYLHEQKLSRLAFRPIGSDAMLGTPQFPRNLCSSMPLDPSNHSIEENIFADGGGRFSIPRQEHLLPLNHVQDWPVNGVNLPMPASSSHHQINQNWFSNDEVVRDGWSGGVAPHQDIRNSGQVADESLYDVLSQCNGLRSEVHLGSTGAVEQFVQSGNYVRVGRAPVLPMITNVVPTGPNRGLGLNYMNGNEAQSGWMNLPRSLQDTAGKSFPRVWNDKDLGR 818
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu2g13591 818 PANTHER NFRKB-RELATED 1 812 IPR024867 GO:0031011(InterPro)
Pslu2g13591 818 CDD DEUBAD-NFRKB 89 195 - -
Pslu2g13591 818 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 87 198 IPR044867 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu2g13591 - -