AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu2g13674 ATGGCAGCACCTACATATTTATCAGGAGCTGCTAAAACACCTTATCATTTCTCCAAATCAGATGTACATTATAGTCATCTCCGTTTCACTTTGTCCGTTGCGTCGTTTAAGGGGTTAAATAGAGCGAGATATGGTCCAGTTTTGGGTAAGGGGAAAGGGGGGATGAAGGTTGTGTGTAATGTGCGAAAAATAGATGTTGTTCTTAAGAGAAGTGAACTCGAAACTAGAGGTTTACAAGGGTTAAGTAAACAGTTGTCGTGTGTGATGAAGTTTGGTGGTTCGTCTGTTGCGTCTGCTGAGCGGATGAAAGAAGTGGCTGATCTTATTCTTAGTTTTCCGGAAGAGAGTCCGGTTATTGTTTTGTCTGCCATGGGCAAGACTACTAACAAGCTTTTAGTGGCTGGAGAGAAAGCTGCAAGTTGTGTTTCGGTTGTTTCTGAAATTGAAGAATTGAGCTTTGTGAAAGAACTACATTACAGGACAGTTGAAGAACTTGGATTAGAGAGAGCACTTGTGACAGACCACTTAGAAAAGTTAGAGCGACTTTTGAATGGGATTTCTGTACTAAAAGAATTCACACCACGTGCAAGAGACTATTTAGTTTCTTTTGGGGAGTGCATGTCCACAAGAATTTTTGCAGCCTACTTGAATAAAGTCGGTGTCAAAGCACGCCAATATGATGCATTTGATATTGGTTTCATAACGACGGATGACTTCACTAATGCGGATATTTTGGAAGCAACGTATCCAGCTGTAGCAAAGAGACTAAATGGTGATTGGAATAGTGATCCTGCAATTCCTATTGTCACTGGCTTTCTTGGAAAGGGTTGGAGAACTTGTGCTGTGACTACATTGGGTAGAGGTGGTAGTGATTTGACTGCCACTACCATCGGTAAAGCACTTGGGTTGAGGGAAATTCAGGTATGGAAAGATGTTGATGGTGTTTTGACATGTGACCCTAACATATACTCGGGTGCAGAACCTGTGCCATATTTGACCTTTGATGAGGCAGCCGAACTTGCATATTTTGGTGCCCAGGTTCTACATCCACAGTCTATGAGGCCCGCTAGAGAGGGTGATATACCTGTTAGGGTTAAAAATTCTTATAACCCTAATGCTCCAGGTACCCTCATCACTAAATCAAGAGATATGAGTAAGGCAGTACTAACCAGCATTGTTTTGAAACGCAATGTAACAATGTTGGACATTGTTAGTACTAGGATGCTTGGGCAATTTGGATTTCTCGCTAAGGTGTTTTCGATATTTGAGGATTTGGGTATATCTGTGGATGTTGTAGCTACCAGTGAAGTTAGCATTTCGTTAACTTTAGATCCTTCAAAGCTTTGGAGCAGGGAGTTGATTCAGCAGGAACTTGATCATGTTGTTGAAGAACTTGAAAAAATTGCTAAAGTGAAACTTCTTCAAAACAGATCGATTATTTCACTGATTGGAAATGTTCAGAGGTCCTCACTTGTATTGGAGAAGGCGTTTCGTGTTCTTCGAGTGAATGGAGTGAATGTTCAAATGATATCCCAAGGAGCATCGAAGGTGAATATATCATTGATAGTAAATGACAGTGAATCAGAAAAATGCGTGAAAGCTTTGCATACAGCATTCTTTGAAAGTGATATGTCGGATCTTGACTAA 1647 40.8 MAAPTYLSGAAKTPYHFSKSDVHYSHLRFTLSVASFKGLNRARYGPVLGKGKGGMKVVCNVRKIDVVLKRSELETRGLQGLSKQLSCVMKFGGSSVASAERMKEVADLILSFPEESPVIVLSAMGKTTNKLLVAGEKAASCVSVVSEIEELSFVKELHYRTVEELGLERALVTDHLEKLERLLNGISVLKEFTPRARDYLVSFGECMSTRIFAAYLNKVGVKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLNGDWNSDPAIPIVTGFLGKGWRTCAVTTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPNIYSGAEPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGDIPVRVKNSYNPNAPGTLITKSRDMSKAVLTSIVLKRNVTMLDIVSTRMLGQFGFLAKVFSIFEDLGISVDVVATSEVSISLTLDPSKLWSRELIQQELDHVVEELEKIAKVKLLQNRSIISLIGNVQRSSLVLEKAFRVLRVNGVNVQMISQGASKVNISLIVNDSESEKCVKALHTAFFESDMSDLD 548
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu2g13674 548 FunFam Aspartokinase 1 471 540 - -
Pslu2g13674 548 SUPERFAMILY Carbamate kinase-like 88 381 IPR036393 -
Pslu2g13674 548 FunFam Aspartokinase 399 470 - -
Pslu2g13674 548 FunFam Aspartokinase 196 378 - -
Pslu2g13674 548 SUPERFAMILY ACT-like 468 543 IPR045865 -
Pslu2g13674 548 Pfam Amino acid kinase family 87 367 IPR001048 -
Pslu2g13674 548 CDD AAK-AK-LysC-like 87 379 IPR041746 -
Pslu2g13674 548 PANTHER ASPARTATE KINASE 84 541 - GO:0004072(PANTHER)|GO:0005829(PANTHER)|GO:0009089(PANTHER)|GO:0009090(PANTHER)|GO:0009570(PANTHER)
Pslu2g13674 548 ProSitePatterns Aspartokinase signature. 88 96 IPR018042 GO:0004072(InterPro)|GO:0008652(InterPro)
Pslu2g13674 548 FunFam Aspartokinase 125 220 - -
Pslu2g13674 548 NCBIfam aspartate kinase 88 541 IPR001341 GO:0004072(InterPro)|GO:0008652(InterPro)
Pslu2g13674 548 Gene3D - 390 540 - -
Pslu2g13674 548 Gene3D Aspartokinase, catalytic domain 125 220 IPR042199 -
Pslu2g13674 548 Gene3D - 399 474 - -
Pslu2g13674 548 Gene3D - 88 378 IPR036393 -
Pslu2g13674 548 Pfam ACT domain 480 539 IPR054352 -
Pslu2g13674 548 SUPERFAMILY ACT-like 387 485 IPR045865 -
Pslu2g13674 548 ProSiteProfiles ACT domain profile. 403 479 IPR002912 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu2g13674 K00928 aspartate kinase [EC:2.7.2.4]
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Event-related genes

Select Gene_1 Gene_2 Event_name
135536 Pslu2g13674 Pslu4g01688
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr2:101651002 Pslu2g13674 Pslu-Chr2:101983843 dispersed
Pslu Pslu-Chr2:101983843 Pslu4g01688 Pslu-Chr4:11116279 dispersed