AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu2g13717 ATGATGAATTCTATTCTCTCTCTAGTAACAATCCTGTCCGTCGTCTCATCATCGGCGATCGCCGGATCCGATTCTCCGTTCATCGTAGCTCACAAGAAAGCTACGCTTAACAGACTCAAATCCGGCGCTGAAAAAGTCTCCGTTTCAATCGATATATATAATCAAGGATATGCGACCGCTTACGATGTCAGTCTTACGGATGATGGTTGGTCTTCTGAGATATTTAAAATCATCTCAGGGAACACTTCAACCTCTTGGGAAAGGCTTGATGTAGGTGCTCAAGTATCCCACTCCTTTGAGTTGGAGTCAACTGTGAAGACTGTATTTTATAGCAAACCAGCTGTTGTTACATTCCGAGTGCCAACAAAGGCTGCACTACAGGAGGCATATACGACTTCGCTTCTACCTTTGGAAATCCTATCCGATAAGCCTCAAGAGAGTGTACTTAATGTTAGGTTGTTGGCTAAGTACGGCTCATTGGTATCAGTAATATCCATTGTGGTTTTATTTGTGTACCTGGTGGCAACTCCATCCAAATCTGGTGCTGCAAAGGGAAGCAAGAAGAAACGTTGA 573 43.63 MMNSILSLVTILSVVSSSAIAGSDSPFIVAHKKATLNRLKSGAEKVSVSIDIYNQGYATAYDVSLTDDGWSSEIFKIISGNTSTSWERLDVGAQVSHSFELESTVKTVFYSKPAVVTFRVPTKAALQEAYTTSLLPLEILSDKPQESVLNVRLLAKYGSLVSVISIVVLFVYLVATPSKSGAAKGSKKKR 190
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu2g13717 190 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 4 189 - GO:0005783(PANTHER)
Pslu2g13717 190 Pfam Translocon-associated protein beta (TRAPB) 12 186 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu2g13717 K13250 translocon-associated protein subunit beta
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr2:102260093 Pslu2g13717 Pslu-Chr2:102270611 proximal