Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pslu2g13722 | ATGGGGTGTGCAGCTTCTGTGTACAGAGTTGGAGGTAAGAAGCAAATGAAGATCCCTCTTGTTACCGTACTCGTTCCTTCCCTTCGTATTCCTGCGCATTCCAATATTCAAAAGCCACTTAAAGGCATTGTCCCTAAGGATCTTGCTGATCGTCTTACCTCTTTTAGAACTCAAATTGCTCTTCTGGCTGAAGAAACTGATATATCAGCTGTTCCTGAATTGTTACGTTCATTGGAAGAATACTTGTCGTTATTAGTTGGCCTTACTGATCAAGAACTTGGATGTCGAGAACTGATTGAATTTAAATGGAAAAGTATTGACGATGGACGACAAGAGATATGTGTTGCGGATTCGTGGTTTGAATTACTATCTGTTGTTCATATGATGGCTATGCTGACATTAATGGAGGCAAATTCAAAGTTGATTCCTGATCAAACTGTTTCTAGCGAATCTGTTGAATCTACAGATAACATACGCACTGCTGTCGACTTATTGGTGAAGGCAGCTGGTTACCTGCAGTTCTGTCTTCGTGAAATACTTGTCCAAATTCCACCTCATATCAAGATGAAGCTTCCGGTAGATTTGCAGGAGAATGTAATCGAAGCTACTTATATTCAAGCACTTGGGCAGGGAACAGAAATGCAGCTTGCATCTGCTGTTGAAAGTAAAAATGCTACTTTATCTGTTAAGAGAAGATTAGCATGTGAGCAACTAAGTTATTATGGCCAGGCGCATTACTGTTTGTCAACATGTGACAACCTTAACGGATATGGAAAGAAACATCTATCATTTATCAAATGGAAGTACCTTGAAGCAAAGGCTGCAGCATACTACTACCATGGTTTAATCACAGACAAGGGTACGGAACCATCCTGCCATATCAGTGCAGTGTGTTGTTTTCTTGCTGCAGAAGAGATTCTAACAGAGAGCAAGAAGGCATGTTTAAATTTTTGCCTAACACTTCCGATAACAAGGGCTCCAGCTGCGTGGGGTGCCATGAAGCATTTGAACAAGAAAATTCCTGAAACCACAGCTAAAAAGTCGCAGATGTACGCCTACCTTTTAGAGGAAGAAAAGAGTTTGGACGTATTACCGGACCTGCCTGAGTTCGAGTTGTCGTTAAAAGCAGACGAATATGAATTACCAGATAAAGATTCAGCGTGGGAGAGTGAAAAATGGATAATACCAAATCAAACACTTAAAACTCACTTAACAGATGATGAAGAAGATGATTAA | 1236 | 40.45 | MGCAASVYRVGGKKQMKIPLVTVLVPSLRIPAHSNIQKPLKGIVPKDLADRLTSFRTQIALLAEETDISAVPELLRSLEEYLSLLVGLTDQELGCRELIEFKWKSIDDGRQEICVADSWFELLSVVHMMAMLTLMEANSKLIPDQTVSSESVESTDNIRTAVDLLVKAAGYLQFCLREILVQIPPHIKMKLPVDLQENVIEATYIQALGQGTEMQLASAVESKNATLSVKRRLACEQLSYYGQAHYCLSTCDNLNGYGKKHLSFIKWKYLEAKAAAYYYHGLITDKGTEPSCHISAVCCFLAAEEILTESKKACLNFCLTLPITRAPAAWGAMKHLNKKIPETTAKKSQMYAYLLEEEKSLDVLPDLPEFELSLKADEYELPDKDSAWESEKWIIPNQTLKTHLTDDEEDD | 411 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pslu2g13722 | 411 | PANTHER | UNCHARACTERIZED | 14 | 401 | IPR038898 | - | |
| Pslu2g13722 | 411 | CDD | BRO1-Alix-like | 28 | 375 | - | - | |
| Pslu2g13722 | 411 | Pfam | BRO1-like domain | 50 | 311 | IPR004328 | - | |
| Pslu2g13722 | 411 | SMART | BRO1-2 | 22 | 400 | IPR004328 | - | |
| Pslu2g13722 | 411 | Gene3D | alix-aip1 like domains | 38 | 395 | IPR038499 | - | |
| Pslu2g13722 | 411 | ProSiteProfiles | BRO1 domain profile. | 26 | 411 | IPR004328 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pslu2g13722 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pslu | Pslu-Chr1:4755935 | Pslu2g13722 | Pslu-Chr2:102305349 | dispersed | |
| Pslu | Pslu-Chr2:102305349 | Pslu3g02357 | Pslu-Chr3:15824116 | dispersed |