AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu2g13740 ATGAAGTCGTCATTAGGAAAATTAGGGCGCAGATTATCGATGCAGAAGAGCGATGTGAAGGAGATGAGAGATCATCAACCTTCTGCTCATATTGATGAACTTGCTCAGGCTTCTAAGAATATGCAAGATATGAGAAACTGCTATGATGGCTTATTATCTGCAGCTGCGGCAACGGCTAATAGTATATATGAATTTTCGGAGTCGCTAAGTGAAATGGGGAACTGTTTGCTCGGTAAAACCGCTGCTGATGCTGATACGGAGAGTGGAAAAGTACTATCAACGTTGGGGAATATGCAATTGGAACTTCAGAAAATTGCTGATACTTATCGTTCTTATGTAATTGTGACCATTACCAACCCATCCGAGTCTCTCCTCAGTGAGCTACGAAAAGTGGAGGAGATGAAACTTCAATGTGATGAAAAAAGAGAGGTGTATGAAGACATGGTGGCGCAACACAGAGAGAAGGGAAAATTGAGAAATGGAAAAGTTGAAAGCTCAATTGCACAAAAACTACAAGGAGCTCAAGATGAATATGATGAAGTGACAAGATTATGTGTATTTAGGGTGAAATCACTTAAGGAAGGCCAATTCCGCAGTCTTTTAACACAGGGTGCTCGCCATCATGCTGCACAGTTGAATTTCTTCCGCGAGGGGCTTAAAGCGCTTGAAGCAGTTGAACCTTTTATAAGAAATGCTGCAGAAAAGCATCGCATTGATTATCAACTTAGTGAACTACCTAATCGGAAGTCCCATGAAGGTGAACCTATGAGTGGCTATGAAAGTACTGATGATGGAGAATTAAGTTTTGATTATAAACAAAAGAAACAAGGGCTTGATGATGATGGCACCTCAACAAATCCAATGGAGTTGGACCAGGCAGATGTTCCATATCTTCGAGCTTCAAATTTAGAAGATTCAGTGATAAATCTGAATAAACCTAAAGGGGAGCAGCTTTATGGTAGGCAAACTAGAGTCAGCAGCTATTCTGCCCCACTTTTTCCAGAAAAGATGGATACATCTGAAAGGCCAAAAGAAACGCAACCGCCACAAAAGTTTTACTCTTATGTATTACCTCCTCCCATTGTGGATACCCGAAATCCAATTTCAAGACCTCCTTCATCTATGTCTCATTCCAATTCATTTCACAATTTACAACACTCGTTGCCAGTTGACCATGAGAAGCATTTAAGACGTGTTAGCGATGCTAACACATCGACATCTGCTTTGACTTCAAAGGTACAATCAATAATTAAAGATGGTAACGCTATCAATCCTCCCGTCCAGTTACCCGCTCCTACCGGAAGATTGTCTTTCTCACAACGGGATAATTATAGCAGAACCGATAGTAAAACAGCCAAACGACAATCTTTTTCTGGTCCATTACCGCCAAGCAAACAATTTTCCTTTAAACTTACGTCTAACAATAGTGGGCCTATTACCTCTACTGAACTTCCCCAGCCTCCTTCTCGGGGACCGGTTTCTCAGCCAAATTTGTCATCAAACGTGTCCCGTAGTGCTTCACCGCCTCCTATATCTTCACCTAAGATAAGTGAGCTTCATGAGCTTCCTAGGCCTCCTACCTTCTCGAAACCCATTGCTATTTCTGGTGGTTTGATTGGACATTCAGCACCATTGCTATCCAAAAATCAAGAGATTTCTCCACCAAATAAACGGGCAATGCTTACATCAATCTGTGCATCCCCTCTTCCGCTCCCGCCTTCCGTTCCCAAAAGTTTTTCTATACCTTCAAGTAACAGTGAGACCTGA 1767 41.94 MKSSLGKLGRRLSMQKSDVKEMRDHQPSAHIDELAQASKNMQDMRNCYDGLLSAAAATANSIYEFSESLSEMGNCLLGKTAADADTESGKVLSTLGNMQLELQKIADTYRSYVIVTITNPSESLLSELRKVEEMKLQCDEKREVYEDMVAQHREKGKLRNGKVESSIAQKLQGAQDEYDEVTRLCVFRVKSLKEGQFRSLLTQGARHHAAQLNFFREGLKALEAVEPFIRNAAEKHRIDYQLSELPNRKSHEGEPMSGYESTDDGELSFDYKQKKQGLDDDGTSTNPMELDQADVPYLRASNLEDSVINLNKPKGEQLYGRQTRVSSYSAPLFPEKMDTSERPKETQPPQKFYSYVLPPPIVDTRNPISRPPSSMSHSNSFHNLQHSLPVDHEKHLRRVSDANTSTSALTSKVQSIIKDGNAINPPVQLPAPTGRLSFSQRDNYSRTDSKTAKRQSFSGPLPPSKQFSFKLTSNNSGPITSTELPQPPSRGPVSQPNLSSNVSRSASPPPISSPKISELHELPRPPTFSKPIAISGGLIGHSAPLLSKNQEISPPNKRAMLTSICASPLPLPPSVPKSFSIPSSNSET 588
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu2g13740 588 MobiDBLite consensus disorder prediction 13 28 - -
Pslu2g13740 588 MobiDBLite consensus disorder prediction 334 358 - -
Pslu2g13740 588 Coils Coil 131 151 - -
Pslu2g13740 588 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 586 IPR037488 -
Pslu2g13740 588 MobiDBLite consensus disorder prediction 244 258 - -
Pslu2g13740 588 SUPERFAMILY BAR-IMD domain-like 32 230 IPR027267 -
Pslu2g13740 588 CDD BAR 40 227 - -
Pslu2g13740 588 MobiDBLite consensus disorder prediction 433 512 - -
Pslu2g13740 588 Gene3D Arfaptin homology (AH) domain-BAR domain 26 249 IPR027267 -
Pslu2g13740 588 MobiDBLite consensus disorder prediction 1 28 - -
Pslu2g13740 588 MobiDBLite consensus disorder prediction 569 588 - -
Pslu2g13740 588 MobiDBLite consensus disorder prediction 244 266 - -
Pslu2g13740 588 MobiDBLite consensus disorder prediction 421 523 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu2g13740 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
135539 Pslu2g13740 Pslu4g01704
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr2:102446056 Pslu4g01704 Pslu-Chr4:11189769 dispersed