Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pslu2g13757 | ATGGCTGCTGTCAAAGCTGCGATTCATGTCTCCGACGTACCACATTTTGACCAGGTTAACGACAGCGCCGCCGGATCATTGCCGCTTTACGCCACCCGTCTTCCCGCCGGACTGGATATGAGTAATGGCCGAAAAGTGCTACCGAAATTTATGGTGGTGGGTCACCGTGGTCATGGGATGAACGTGTTACAGTCAACCGATCAAAGAATGAAAGCTTATAAAGAGAATTCAATTCTTTCTTTCAATAACGCTGCTAATCACCCACTTGATTACATTGAATTTGACGTTCAGGTGACAAAAGACGACACACCGGTCATTTTTCACGATGATTTCATCCTCTCCGAAGAAAACGGTGCTGTAACCGAAAAGAGGATCACCGAGTTGACTTTGGATGAATTCTTTAGCTATGGACCTCAAAGGGAAATAGGTCAGGTGGGAAAATCTTTGATGAGAAAATCAAATGGAAACATTGTCGGGTGGGACGTTGAGACCGATGACTATTTGTGTACTCTACAAGAAGCATTCCAAAAAGTTAACCCTTGTTTGGGATTCAACATTGAGTTGAAATTCGATGATTATGTTGTGTATGAACAAGAGTATCTCATTTATGTTCTTCAAGTCATCTTAAAGGTGGTATACGAAAATGCCCAACAAAGACCTGTTATTTTTTCAAGTTTCCAGCCTGATGCGGCCTTGCTTATGAAGAAACTTCAGCAGACGTACCCTGTGTACTTCTTGACGAATGGAGGAAACGAGATATTCAATGATGTGAGAATGAATTCATTGGAAGAAGCCAAAAAGCTGGCCTTGGAAGGTGGATTGGATGGCATTGTTTCTGAAGTGAAGGGTATTTTTAGAAATCCTTCGGTTGTAAGAGAGATTAATGAATCAAATCTCTCCATCCTCACTTATGGCAGATTAAATAATGTCCCTGAAGCCGTGCATGTTCAATATCTTATGGGGGTAGAAGGTGTTATCGTTGATTTAGTACAAGAAATCACGAGTGTCGTGAAGGCATACTGTGAAAGTGAGAAGACAAATTTACTAGGAGGGGAGGGAGGATTAAAGATGAAAGAGAAAACCGATAAGATTGAATTGTCGTTTCTGCTGAGCTTGATCTCACAAGTGATTCAACATTGA | 1140 | 41.58 | MAAVKAAIHVSDVPHFDQVNDSAAGSLPLYATRLPAGLDMSNGRKVLPKFMVVGHRGHGMNVLQSTDQRMKAYKENSILSFNNAANHPLDYIEFDVQVTKDDTPVIFHDDFILSEENGAVTEKRITELTLDEFFSYGPQREIGQVGKSLMRKSNGNIVGWDVETDDYLCTLQEAFQKVNPCLGFNIELKFDDYVVYEQEYLIYVLQVILKVVYENAQQRPVIFSSFQPDAALLMKKLQQTYPVYFLTNGGNEIFNDVRMNSLEEAKKLALEGGLDGIVSEVKGIFRNPSVVREINESNLSILTYGRLNNVPEAVHVQYLMGVEGVIVDLVQEITSVVKAYCESEKTNLLGGEGGLKMKEKTDKIELSFLLSLISQVIQH | 379 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pslu2g13757 | 379 | Pfam | Glycerophosphoryl diester phosphodiesterase family | 55 | 330 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Pslu2g13757 | 379 | SUPERFAMILY | PLC-like phosphodiesterases | 48 | 331 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Pslu2g13757 | 379 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 45 | 339 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Pslu2g13757 | 379 | ProSiteProfiles | GP-PDE domain profile. | 50 | 337 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Pslu2g13757 | 379 | FunFam | Glycerophosphodiester phosphodiesterase GDPD2 | 41 | 339 | - | - | |
| Pslu2g13757 | 379 | PANTHER | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE | 43 | 343 | IPR051578 | GO:0046475(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pslu2g13757 | K18696 | glycerophosphodiester phosphodiesterase [EC:3.1.4.46] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 135540 | Pslu2g13757 | Pslu4g01707 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pslu | Pslu-Chr2:102578269 | Pslu4g01707 | Pslu-Chr4:11218116 | dispersed |