AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pslu2g13818 ATGGGAACAGAAACTAACAGATCAACCGTCGAGATAACGGAACCGTTACTCGATGAATCCAGTCAACAAAAGACAATAGATACAGAATTAGAATCTATACCAGAATGGAAAGATCAGATCACTTTAAGAGGGTTAATCGTCAGTGCTCTATTAGGAACTCTTTTTTGTGTCATTACTCATAAGCTGAATCTCACTGTTGGAATTATTCCGTCGCTAAATGTTGCAGCTGGTTTGCTAGGGTTTTTCTTTGTTAAAACCTGGACTACTTTCAATGAGAAGTTAGGGTTTTTTGTTAAGCCTTTTACTAAGCAAGAGAATACTGTTATCCAGACTTGTGTTGTTGCTTGCTATGGCCTTGCTTTCAGCGGTGGATTTGGGTCATATTTGCTTTCAATGGATGAGAGAACATACAATTTGATTGGTGCTGATTACCCTGGTAATCGAGCGGAAGATGTTAAGAACCCAGGGTTATTGTGGATGATGGGTTTCATTTCTGTTGTCAGTTTTCTTGGCCTTTTCAGTCTTGTTCCACTTCGCAAGGGTGGCAGAGTGGGTAGGCCCGGGCTGGATGATGGTTCAAAACGGATAGTATTCAAAATGCCCGTTAAACTCGGATGTATCGAGTCTTGA 630 40.95 MGTETNRSTVEITEPLLDESSQQKTIDTELESIPEWKDQITLRGLIVSALLGTLFCVITHKLNLTVGIIPSLNVAAGLLGFFFVKTWTTFNEKLGFFVKPFTKQENTVIQTCVVACYGLAFSGGFGSYLLSMDERTYNLIGADYPGNRAEDVKNPGLLWMMGFISVVSFLGLFSLVPLRKGGRVGRPGLDDGSKRIVFKMPVKLGCIES 209
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pslu2g13818 209 Pfam OPT oligopeptide transporter protein 39 180 IPR004813 GO:0035673(InterPro)
Pslu2g13818 209 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 20 180 IPR045035 GO:0016020(PANTHER)|GO:0035673(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pslu2g13818 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pslu Pslu-Chr2:103045820 Pslu6g09885 Pslu-Chr6:71123283 dispersed