Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pslu5g12973 | ATGTATAATCGGCATATGGCGTCGTCGGCAGTTGTTACTAGAGGCGGACAACCGAGTGATAGTGGTGATGCAGTGGTGACTCTTGATCAAGTTCCTAAATGGAGTGATGGAGATTTTAGATATTCTTATGAAATTGAAGATCCTAATTTTCCAAACATGCATTTTCCTGATCCGTTAACGTCGTCTTCTGGGGCGGAGAGTAGTGGGAAAGTTTCTAGGTTTCCAGTTGATCATGAAGTTAATTCGAAGATTTATCTTTGGAGAGGTAATCCGTGGAATCTTGAGGTAGATGCTGTTGTCAACTCTACCAATGAGAACTTGGATGAAGCGCATTGCAGTCCTGGTTTGCATGCTGCAGCTGGGCCTGGTCTTGCTGAAGAATGTGCGACATTGGGTGGTTGCAGAACAGGAATGGCAAAAGTTACTAATGCATACGATCTTCCTGCAAGGAGAATTATACATACAGTTGGGCCTAAGTATGCTGTGAAATATCATACTGCAGCAGAAAATGCTTTGAGTCACTGCTATCGCTCTTGTCTAGAACTTCTCATTGAGAATGGGCTTCAAAGCATTGCTATGGGTTGTATATACACAGAGGCAAAAAATTACCCTCGGGAACCAGCAGCCCATGTGGCAATAAGAACTGTTCGCCGGTTTCTTGAGAAACAAAAGAATGAAATCTCAGCTGTAGTCTTTTGCTTAACGACAACAAATGATACTGAAATATATAAGAGATTGCTTCCCCTCTACTTTCCCCGAGATAAAAAGGAGGAAGAGATTGCCATTTCGAAGCTTCCTGCTGATGTTGGAGATGAAAATGGCGAAACAGTAATAGACGAACGAAAAATCAGAATAAAACCATTACCGAATATCAAGAAGACTATTCCTAAACCTCCCCGAGCTTCACTAGATGTTCCTGTTAGTGATCAAGGATTGACTAGACGGAACTCTTCATATTTGGAATCATATTTAGATCCTGCTTTTATGTCCATAATTAAAGATCCCGATCAACGGCGTACTGAACAATGGGAAAGAACTGCTCGAGCACAAAATGGGTTCAACTTTGCTAAAATGTTAGGGTTTGGTGACCTTGGGGGCCCAGCTCTTTCTGCTGCTGAAGAATATTCGTTACATTCTAGATACCTCGCTAAAGCAAATTCTTTAAATCTTTCCGAAATAGCAGAAATGAAGATTTTGTATCGGGGAGGAGTAGACAGTGAAGGTCGTCCAGTAATGGTTGTCGTTGGGGCACATTTTCTCCTTCGATGCCTTGATCTTGAAAGATTTGTTCTTCATGTAATTAAGGAGTTTGAACCCTTGATCCAGAAACCTTATAGCATTGTTTACTTTCACTCTGCTGCATCTTTACAAGTGCAGCCAGATCTGGGATTTATGAGGAGATTACAGCAAATACTTGGTAGAAAAAGCCAGAGGAATCTTCATGCAATATATATCCTACATCCGACCTTTGGGCTGAAGGCTGCGATACTTGCGTTGCAACTATTAGTGGATGGCACGGTGTGGAAAAAAGTTGTATATGTTGATCGACTTCTTCAGCTTTTCAGATACGTTCCTCGGGAGCAGCTAACAATCCCCGATTTTGTGTTCCAGCATGACTTGGAAGTTAATGGAGGAAAAGGGCTAATTGTGGATCCAAGAACAAAATATGTTTACCATCGACCGTAG | 1686 | 41.76 | MYNRHMASSAVVTRGGQPSDSGDAVVTLDQVPKWSDGDFRYSYEIEDPNFPNMHFPDPLTSSSGAESSGKVSRFPVDHEVNSKIYLWRGNPWNLEVDAVVNSTNENLDEAHCSPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRIIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLQSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKNEISAVVFCLTTTNDTEIYKRLLPLYFPRDKKEEEIAISKLPADVGDENGETVIDERKIRIKPLPNIKKTIPKPPRASLDVPVSDQGLTRRNSSYLESYLDPAFMSIIKDPDQRRTEQWERTARAQNGFNFAKMLGFGDLGGPALSAAEEYSLHSRYLAKANSLNLSEIAEMKILYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLHVIKEFEPLIQKPYSIVYFHSAASLQVQPDLGFMRRLQQILGRKSQRNLHAIYILHPTFGLKAAILALQLLVDGTVWKKVVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVYHRP | 561 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pslu5g12973 | 561 | SMART | sec14-4 | 392 | 538 | IPR001251 | - | |
| Pslu5g12973 | 561 | Gene3D | Leucine Aminopeptidase, subunit E, domain 1 | 17 | 256 | IPR043472 | - | |
| Pslu5g12973 | 561 | CDD | SEC14 | 396 | 532 | IPR001251 | - | |
| Pslu5g12973 | 561 | MobiDBLite | consensus disorder prediction | 55 | 69 | - | - | |
| Pslu5g12973 | 561 | CDD | Macro-GDAP2-like | 82 | 250 | IPR035793 | - | |
| Pslu5g12973 | 561 | SUPERFAMILY | Macro domain-like | 70 | 280 | IPR043472 | - | |
| Pslu5g12973 | 561 | SMART | YBR022w-8 | 83 | 212 | IPR002589 | - | |
| Pslu5g12973 | 561 | Gene3D | - | 391 | 542 | IPR036865 | - | |
| Pslu5g12973 | 561 | PANTHER | GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED | 21 | 285 | - | - | |
| Pslu5g12973 | 561 | ProSiteProfiles | CRAL-TRIO lipid binding domain profile. | 386 | 535 | IPR001251 | - | |
| Pslu5g12973 | 561 | ProSiteProfiles | Macro domain profile. | 71 | 251 | IPR002589 | - | |
| Pslu5g12973 | 561 | SUPERFAMILY | CRAL-TRIO domain | 390 | 529 | IPR036865 | - | |
| Pslu5g12973 | 561 | Pfam | Macro domain | 100 | 212 | IPR002589 | - | |
| Pslu5g12973 | 561 | Pfam | Divergent CRAL-TRIO domain | 408 | 539 | IPR001251 | - | |
| Pslu5g12973 | 561 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Pslu5g12973 | 561 | MobiDBLite | consensus disorder prediction | 52 | 71 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pslu5g12973 | K24997 | ganglioside-induced differentiation-associated protein 2 |