AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00022 ATGAGTAGCATACAAGTTGAGGTTGCATCAGAAGATCTGCAGTCTCCAAATAAATGGTGTGTTCCTCTCAAGGAAGAGGTTTTTGGTGCATTTATGGCGAAAGGGGGTCCAGTGGTGCATAAGGTTTTTGGTGATAAATCATTGTTTGGTCCATTATTGTTTAGAAAATTCTTTGATCCATCAGATGCCTTTCCACTATGGGAATTTGAACCGGGTGCATTGTTGTCTCATCTTCAGAACCCTTGTGTCCATTGGTTTCAAACAGATGCATGTTGTATTCTAAAATCAGAACTACCTGCAAAAATAGAAAACAACAGCCTTGGAATTCATGTTGAGAATGGAAAGGTTATAGAGATTAGTGGGGTATGGAAGACACATGGAGAATCAAAAACAAGGGATTGGAGAAGTGGCAAGTGGTGGGAACATGGGTTTGTTCGGAGGCTAGAGTTGCCGGACAACACAGACTGGAACAAAATGGAGGTGTATCTCAAGAATGACTTCACACTTTTGGACATTACACTTCCAAAATGGACTCCTACTCCTACTCCAACTGATGCATCATCATCAGCGACTACTGCTTGA 582 41.58 MSSIQVEVASEDLQSPNKWCVPLKEEVFGAFMAKGGPVVHKVFGDKSLFGPLLFRKFFDPSDAFPLWEFEPGALLSHLQNPCVHWFQTDACCILKSELPAKIENNSLGIHVENGKVIEISGVWKTHGESKTRDWRSGKWWEHGFVRRLELPDNTDWNKMEVYLKNDFTLLDITLPKWTPTPTPTDASSSATTA 193
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00022 193 PANTHER 21.7 KDA CLASS VI HEAT SHOCK PROTEIN 3 180 - -
Sain12g00022 193 Gene3D - 49 184 IPR008978 -
Sain12g00022 193 Pfam Hsp20-alpha crystallin family 101 180 IPR002068 -
Sain12g00022 193 SUPERFAMILY HSP20-like chaperones 54 180 IPR008978 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00022 - -