Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00032 | ATGGCATCCATGGCTACAACCTTCGCTTCCTCTCTCTCCACCAAGGCCAAGGCCAAGGCCAGTCAATCATCCTTCCATGGCGTTCCCGTTGCCTCTCCGGTTCGGATCCAACCCATCAAATCCAACCAAAACAAGAGCATGGCCCCGATTACCATGTCTTATGATCTCGGATCCTTCACCTTTCGACCTATCAAGGAAGCGATTGTGTCTCGTGAGATGACCAGGAGGTACATGACGGACATGATAACCTATGCCGATACCGACGTCGTTGTAGTCGGTGCTGGCTCCGCTGGTCTCTCCTGCGCCTATGAGCTTAGCAAAAACCCTAATGTTCAGGTAGCCATCATTGAGCAATCAGTGAGCCCTGGTGGTGGAGCATGGCTTGGGGGACAACTGTTTTCAGCCATGGTTGTCCGGAAGCCTGCACACCTGTTCCTTGATGAGCTAAACATCGAGTACGACGAGCAAGAAGAGTACGTTGTGATCAAGCACGCTGCCCTGTTCACGTCGACCATCATGAGCAAGCTGTTGGGTCGGCCAAATGTGAAGCTGTTCAACGCAGTGGCTGCAGAGGACTTGATCATCAAGGAAGGTAGAGTAGGCGGTGTTGTTACCAACTGGGCTTTGGTGTCAATGAACCATGACACACAGTCTTGCATGGATCCAAATGTGATGGAGGCTAAGGTGGTTGTGAGCTCATGTGGGCATGATGGTCCGATGGGTGCGACAGGGGTGAAACGATTGAGGAGCGTTGGTTTGATCGAGAGCGTTCCTGGGATGAAGGCTCTTGACATGAACACTGCTGAGGATGCGATTGTGAGGCTGACAAGGGAGATTGTTCCTGGTATGATTGTCACCGGAATGGAAGTTGCAGAGATTGACGGATCTCCAAGAATGGGTCCAACTTTTGGGGCTATGATGATATCTGGACAGAAGGCGGCTCATTTGGCATTGAAGGCGTTGGGGCTCCCCAATGCATTAGATGGAAGCAACATCCACCCAGAGCTCATCCTTGCTGCTGCTGCTGATTCGGTTGAGAGTGTGGATGCCTAA | 1053 | 51.85 | MASMATTFASSLSTKAKAKASQSSFHGVPVASPVRIQPIKSNQNKSMAPITMSYDLGSFTFRPIKEAIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELNIEYDEQEEYVVIKHAALFTSTIMSKLLGRPNVKLFNAVAAEDLIIKEGRVGGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPMGATGVKRLRSVGLIESVPGMKALDMNTAEDAIVRLTREIVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALKALGLPNALDGSNIHPELILAAAADSVESVDA | 350 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00032 | 350 | Hamap | Thiamine thiazole synthase, chloroplastic [THI4]. | 5 | 330 | IPR027495 | GO:0009228(InterPro) | |
| Sain12g00032 | 350 | PANTHER | THIAMINE THIAZOLE SYNTHASE | 13 | 349 | - | - | |
| Sain12g00032 | 350 | Gene3D | - | 55 | 85 | - | - | |
| Sain12g00032 | 350 | Gene3D | - | 86 | 321 | IPR036188 | - | |
| Sain12g00032 | 350 | Pfam | Thi4 family | 70 | 303 | - | - | |
| Sain12g00032 | 350 | FunFam | Thiamine thiazole synthase, chloroplastic | 86 | 321 | - | - | |
| Sain12g00032 | 350 | SUPERFAMILY | FAD-NAD(P)-binding domain | 47 | 314 | IPR036188 | - | |
| Sain12g00032 | 350 | NCBIfam | sulfide-dependent adenosine diphosphate thiazole synthase | 66 | 321 | IPR002922 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00032 | K03146 | cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 138617 | Sain12g00032 | Sain9g00163 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 4726526 | Sain | Sain12g00032 | Sain-Chr12:375194 | Sain9g00163 | Sain-Chr9:3868590 |