AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00033 ATGGAGGATATGTTTGTGGCAATCCTTTCAATGCTTCTAGTTGTTGCTTTAATTCCACTTTACCTATGGAGACGTCGTCAGGTTCCGCAGTCTCATCATGAACAGGAAGAAGAAGAAGCTCAGGTTCAACAGAGAGAAGCTGTTGTAAGGCCCACTGGTAGTCGTAGTAGGATGCGTAGACGGCATACTTCAGCAGCCAGCACATCTTCTGCTCCACCACCACCAGCTGCAGAAGAAACCGATGATGGAAGTGATGAGGAAGCTGTTGAAGGGGAATATTATAATGCAAAATCATCAAAGAAGAAAGGAAGGAAGAAAGAGGAACGCCAAGCACAACGGCAGGCTGAAGAGGCTGCAAGGGAGTCGAGACATACAAAACAAGACCGTTATGCAGAAATACGCAGAAGGAAGGATGAGGAACACGAAGCAAGGGAGCGTATGCTGGAAGAAGAAGCTGAGGCGCGGAAGGCAAAGGAGGAGGAAGCTGCAGCGTTAGAGTTTGAGAAGTGGAAGGGAGAATTTTCAGTAGATGCTGAAGGTACCACAGAAAATGAAATTCAAGATGGAAGCCAGGGACTGCTTTACGATTTTGTGGAGTACATCAAGAAACAGAAATGCATTCCCTTGGAAGATCTTGCTGCAGAATTCAAACTGCGGACCCAGGACTGTATCAATCGGATCACCTCATTGGAAGATATGGGGAGATTATCTGGTGTGATGGACGATAGAGGAAAGTACATACACATCTCTCATGAAGAAATGCAGGCAGTTGCAGACTACATCAAGCGTGAAGGGAGGGTGAGCATCGCTCATCTAGCCAGCAAGTCCAACCAATTTATAGATTTGGAACCCAAAGCACCGCTGATCGAGGAGGATTTAGGAGCTCAAGATGAGATTGCAGTTGCTTGA 909 46.53 MEDMFVAILSMLLVVALIPLYLWRRRQVPQSHHEQEEEEAQVQQREAVVRPTGSRSRMRRRHTSAASTSSAPPPPAAEETDDGSDEEAVEGEYYNAKSSKKKGRKKEERQAQRQAEEAARESRHTKQDRYAEIRRRKDEEHEARERMLEEEAEARKAKEEEAAALEFEKWKGEFSVDAEGTTENEIQDGSQGLLYDFVEYIKKQKCIPLEDLAAEFKLRTQDCINRITSLEDMGRLSGVMDDRGKYIHISHEEMQAVADYIKREGRVSIAHLASKSNQFIDLEPKAPLIEEDLGAQDEIAVA 302
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00033 302 FunFam DDRGK domain-containing protein 1 192 249 - -
Sain12g00033 302 Coils Coil 130 168 - -
Sain12g00033 302 Coils Coil 101 128 - -
Sain12g00033 302 PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 73 291 IPR050899 -
Sain12g00033 302 MobiDBLite consensus disorder prediction 34 157 - -
Sain12g00033 302 Pfam DDRGK domain 96 281 IPR019153 -
Sain12g00033 302 MobiDBLite consensus disorder prediction 108 157 - -
Sain12g00033 302 SUPERFAMILY Winged helix DNA-binding domain 188 257 IPR036390 -
Sain12g00033 302 Gene3D - 192 249 IPR036388 -
Sain12g00033 302 SMART DDRGK-2 96 281 IPR019153 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00033 K23344 DDRGK domain-containing protein 1