AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00054 ATGGCACCCCCTTCTTCTTCCTCCATCTTCATCTGCAAAACCCTCACCCTCATCGGTCTCTTACTCGCTTCTTGTACCCATACTTCACAGGTACAAGCCTTTAAAGCACCAATCCATCCACAAGACATACTCCCACTTTTACCCCGCCAAGTTTCATGGCCTATTCTCAACTCCCTTCGAGGTGCCGCCGATCTTCTCCCGAGTTTCGTCGGCGCTGCATCGACTTCAAATCATTCCGATTTGCAGTGGAAGGGGTCTTGCTTTTATCAGAACACTGCGTGGTTACAACTCCACAACAAAAGTGGTAGCCAATTTGGTGGAGGCACTCTTCATATCACGGTAAGCAATGCACACAGTTGGACATGTATGGATATTTATGTCTTTGCTACTCCATATCGTGTGACGTGGGACTATTACTTTTTATCCCGTGAGCATACACTTGAGTTCGACGAATGGGGAGGGAAAGCCGAGTATGAATATGTAAAACGTAAGGGCGTTGCCATATTTCTCATGGAAGCAGGGATGTTAGGCACCTTCTCAGCATTATGGGAGGTCTTCCCCCTGTTCACAAATACTGGATGGGGTGAAAGTTCTAATCTTGCTTTTCTCAAGAAGCATATGGGTGCTACCTTTGAAGCGCGTCCTGAGCCATGGGTTACAAACATTACCGTAGATGACATACACTCAGGAGACTTTCTTGCGATATCGAAAATTCGTGGTCGATGGGGCGGGTTTGAGACGCTTGAGAAATGGGTATCTGGGGCATATGCGGGTCATTCTGCTGTTTGCTTGAGGGACGCCGAAGGAAAACTATGGGTTGGGGAATCCGGACATGAAGATGAAGAGGGTCAAGATGTTATTGCTTTGTTGCCGTGGGATGAATGGTGGAACTTTGAGCTGACGGAAGATGATGCTAATCCGCATATTGCATTGCTTCCTTTGCATCCTGATCTTCGATCTAAGTTTAATGAGACTGCTGCATGGGAGTATGCACAAAGCATGATAGGGTTGCCATATGGTTTTCATAATTTGATATTTAGCTGGATAGACACTATAAGTGATAATTACCCACCACCTTTGGATGCTCATCTGGTTGCTTCTGTTATGACTGTGTGGAATCAACTGCAGCCCGCATATGCTGCTAACATGTGGAATGAAGCCTTGAATAAGCGGCTTGGTACTCGGGGGCTTGATCTTCCTGATATTTTGGTGGAAGTTGAAAGGCGTGGTTCATCTTTTGCTGAGCTACTGACTGTACCTGAACAAGATGATTGGGTATATGCTGATGGAAAATCGACTTCTTGTGTTGCATTTGTCCTTGAAATGTACAAGGAAGCAGGACTCTTTGGAGATCTTGCAAGCCAAATTCAAGTTACTGAGTTCACGATAAAGGATGCTTACATGCTCAAGTTTTTTGAAAACAATTCGAGTCGGCTGCCAAAGTGGTGTAACGAAGGGGACACGGTAGAGCTTCCGTTCTGTCAAATCAAAGGGAAGTATCGAATGGAATTACCTGAATACAATACTATCGATCCATACCCTCATATGACTGAAAGTTGCCCCTCACTTCCCCCAGACTATTCAAGGCCAGACTACTGCTGA 1602 45.57 MAPPSSSSIFICKTLTLIGLLLASCTHTSQVQAFKAPIHPQDILPLLPRQVSWPILNSLRGAADLLPSFVGAASTSNHSDLQWKGSCFYQNTAWLQLHNKSGSQFGGGTLHITVSNAHSWTCMDIYVFATPYRVTWDYYFLSREHTLEFDEWGGKAEYEYVKRKGVAIFLMEAGMLGTFSALWEVFPLFTNTGWGESSNLAFLKKHMGATFEARPEPWVTNITVDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAVCLRDAEGKLWVGESGHEDEEGQDVIALLPWDEWWNFELTEDDANPHIALLPLHPDLRSKFNETAAWEYAQSMIGLPYGFHNLIFSWIDTISDNYPPPLDAHLVASVMTVWNQLQPAYAANMWNEALNKRLGTRGLDLPDILVEVERRGSSFAELLTVPEQDDWVYADGKSTSCVAFVLEMYKEAGLFGDLASQIQVTEFTIKDAYMLKFFENNSSRLPKWCNEGDTVELPFCQIKGKYRMELPEYNTIDPYPHMTESCPSLPPDYSRPDYC 533
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00054 533 PANTHER OS01G0793500 PROTEIN 8 533 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00054 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
138626 Sain12g00054 Sain9g00138
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
4661743 Sain Sain12g00054 Sain-Chr12:589228 Sain9g04015 Sain-Chr9:213045071
4726530 Sain Sain12g00054 Sain-Chr12:589228 Sain9g00138 Sain-Chr9:3245039