AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00060 ATGGGTTGCAGAAATGGAGGAGAATTCCAAGCCCAACAAGACGAAAGAAGATCATCATCATCGTCGATTGTGAACGATGCGTTGCTGTTAACAACCATGTGCATCATTGGCTTCCCTGTTGACGTTCACATCAAGGATGGTTCCGTTTATTCTGGAATCTTCCACACCGCTTCTGTTGATGACCATTATGCTATCGTGTTGAAACGAGCAAGGATGATCAAGAAGGGAAGTTGTGATTCGAATGTGGCCAATGAGGGGGTGATAGGAACACTTGTAATCCAGTCGGAGGATCTTGTCCAAGTGGTTGCGAAGAGAGTACTGCTTCCGGCGGATGGTTTTGCTGGACATGAAACCGGGGATGATACAGAGGCTGTGGCATGCGCTTTTCCTTCTAACGGCACTCCATTGACAGAAGCAAATAAAACGATCTCTAGCAAGTCAAATGTTGATCAGCCACATGCTAATCGAACAAGATGCTCGTCGGGAACTGAGAACGAGCTTGCTAATGGGTTTAGGCCCGAGCTTCCTATTCACTCGAGCAATGCTCTTGAAGTCAATAGAAAAGCAGATGTCAGAGGTTCAACAAAGAAAGAAGAATCTTTGAACGATCAAGATGATAACAATCAAGTTCAAGCAAAACCACCGAAAGTCCCTGCTAACGGAGTACCCCCTGATGGTGCTGCTTCTTCTACTTCCAAGAAACAAGAAACCATTGATGCTGTTCCTTCTGCTACAATATCTTCAGAACCATCATCGACTCCAAACGAAACCGTTACTTCGAAAATCTCGAATCCTAATCGAGCCACTAAGGAATTTAAACTAAACCCTGGTGCAAAGATTTTTTCACCATCGTTTCCAAATAAGAGATCGGCTACTCCTCCAGCCATGCCAGCGGGTGCGAATCTTGCATATGTTCCGGACAGTTATCCTGCTGTACCGGTTGCCACTCCACAGCCGGAAGTTGAAATCAGCCCGTATGCGCATCATCGTTCGGTGCCGGTTAAGTTTGTTCCATACGGTAACCTGCTTTCTGGAAATGGGGGCGGCGATGTTCAACATCCTCCACCTATTGTTGGATATGTGGCAAATAGGAGTCAGCCGGTTAGATATGGTGGGCAATATCATCCTGTTCAAACAGCGCCTACCTATGTCCAACCAAGCTCTCAGAATGTAATGGTTGGAAGATTGGGACCGGTTTTCTACGTCCATCCACTTCCTCAAGATATGGTCCCGAGTACAACCGGTTTCTCTCAAGGGTCTGCGTGCTCTATCTTAACTCCGCATCAAGTCCATGTCCCTAAACACCAAGGAAATGGAGCGGCCCAAGCGTTGCAGCTATGTGCGACACCACCATTTATAGCTGCAGGTGGTCAGGCACCGTTTGTGTTGCCGAGCCACATTCCGATATCGCAACCGCCGTACCCGGTGATCCGACCGATCTCGGTCCCGGGGTCTAATGGTTTCTTAGTATCAAAGTATTCTTGA 1485 47.41 MGCRNGGEFQAQQDERRSSSSSIVNDALLLTTMCIIGFPVDVHIKDGSVYSGIFHTASVDDHYAIVLKRARMIKKGSCDSNVANEGVIGTLVIQSEDLVQVVAKRVLLPADGFAGHETGDDTEAVACAFPSNGTPLTEANKTISSKSNVDQPHANRTRCSSGTENELANGFRPELPIHSSNALEVNRKADVRGSTKKEESLNDQDDNNQVQAKPPKVPANGVPPDGAASSTSKKQETIDAVPSATISSEPSSTPNETVTSKISNPNRATKEFKLNPGAKIFSPSFPNKRSATPPAMPAGANLAYVPDSYPAVPVATPQPEVEISPYAHHRSVPVKFVPYGNLLSGNGGGDVQHPPPIVGYVANRSQPVRYGGQYHPVQTAPTYVQPSSQNVMVGRLGPVFYVHPLPQDMVPSTTGFSQGSACSILTPHQVHVPKHQGNGAAQALQLCATPPFIAAGGQAPFVLPSHIPISQPPYPVIRPISVPGSNGFLVSKYS 494
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00060 494 MobiDBLite consensus disorder prediction 138 269 - -
Sain12g00060 494 PANTHER ATAXIN 2-RELATED 147 457 IPR045117 GO:0003723(InterPro)|GO:0003729(PANTHER)|GO:0010494(PANTHER)|GO:0034063(PANTHER)
Sain12g00060 494 Pfam Ataxin 2 SM domain 25 104 IPR025852 -
Sain12g00060 494 MobiDBLite consensus disorder prediction 225 269 - -
Sain12g00060 494 MobiDBLite consensus disorder prediction 189 204 - -
Sain12g00060 494 MobiDBLite consensus disorder prediction 138 167 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00060 - -