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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00069 ATGGAAAGTGAGTATGGTATGTACAGAAAAGGAAGCAGTGGGTGGTCATCCATGGTTGGAAATGAAGAATTTCAAGAAACTGAAATTTGGTCAGTTTTGAAAGAAAGAAAAGATTTTGATTCAAAGTTTAAAAAAGGATCATCTTCAAGAGCTATTTCTTTTCCAAGTGCAGCCAGAATGATTCCTAGGTCTAATACCAACAACAATCCTGAGGTTCCACAACAACAATCAGCACCAGTCAACATTCCTGATTGGTCAAAGATCTATGGTAAGTCAAAGAGATCATCACAGAACTCTGCATGGCATGATTATGATGATGATGATGATGATGATGGTGGTGGTCATGATGGCAGATTGATTTGGGACAGTGATGATGATGATGATGATAATGGAAACATGATGCCTCCTCATGAATGGATTGCGCAGAAGCTTGCAAGGAGTCAAATATCTTCTTTTTCTGTGTGTGAAGGTGCTGGAAGAACACTTAAAGGCAGAGATCTGAGTAGGGTAAGAAATGCTGTTTTAACCAAAACTGGATTTCTTGAATAA 549 38.43 MESEYGMYRKGSSGWSSMVGNEEFQETEIWSVLKERKDFDSKFKKGSSSRAISFPSAARMIPRSNTNNNPEVPQQQSAPVNIPDWSKIYGKSKRSSQNSAWHDYDDDDDDDGGGHDGRLIWDSDDDDDDNGNMMPPHEWIAQKLARSQISSFSVCEGAGRTLKGRDLSRVRNAVLTKTGFLE 182
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00069 182 PANTHER EMB|CAB72159.1 19 181 - -
Sain12g00069 182 MobiDBLite consensus disorder prediction 40 136 - -
Sain12g00069 182 Pfam Senescence regulator 22 182 IPR007608 -
Sain12g00069 182 MobiDBLite consensus disorder prediction 1 20 - -
Sain12g00069 182 MobiDBLite consensus disorder prediction 46 82 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00069 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
4661752 Sain Sain12g00069 Sain-Chr12:785144 Sain9g02499 Sain-Chr9:154301492
4703728 Sain Sain1g01617 Sain-Chr1:105185457 Sain12g00069 Sain-Chr12:785144