AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00084 ATGCTGCTTCAGAATTGGAGCTTTTCTTCTTCCCGAATGTTACACTCCACAAGTCAAAGCAACAGAATCGATTACGATTCTACGAGAAGAAGAAGAAGAAGAAACCTCAAAGCGTCTCTTAGAGTTGGAACGGATGTAATCGTTGAAATAGCTCACAATAAGGCACTGATAGCAGCAGCTGTCTGTGCTACAGTTGGACAGTTGGTGAAACCTTTTACTGCTTCCATTTTGTATCGAAGAGATTTTGATCCAAAAGCCGCGATTCAGGCGGGAGGGTTTCCTTCAACCCATTCTTCTGCAGCTGTGGCTACTGCAATGTCAGTTGGTTTGGAAAGGGGTTTCTCGGATTCCGTTTTTGGATTAGCGGTTGTGTATGCTGCTCTTACCATGTATGATGCACAGGGTGTTAGAAGGGAAGTGGGAGTTCATGCAAGAACATTAAACAAAGTATTGAACACATATTCGTGTGATGCCAATGATCTGATTGAATCAGAATCTGGCAAGTTGGAGGAAACAAGTAGTAGTACTAGTAGTCTTGGGCCAGATTTGAATAAAGAAACAACACTTGTTATTACATCTGATAAGAAGAGGGCAAAAGGGTCAGAACCCATCTCTGGTTCACTGAAAGAATCAATTGGTCACACTGAAATTGAAGTTGCTGCAGGTGCCTTGTTGGGCTTACTTGGGAGCTTAGCAATCTACTCTTTATGA 711 42.48 MLLQNWSFSSSRMLHSTSQSNRIDYDSTRRRRRRNLKASLRVGTDVIVEIAHNKALIAAAVCATVGQLVKPFTASILYRRDFDPKAAIQAGGFPSTHSSAAVATAMSVGLERGFSDSVFGLAVVYAALTMYDAQGVRREVGVHARTLNKVLNTYSCDANDLIESESGKLEETSSSTSSLGPDLNKETTLVITSDKKRAKGSEPISGSLKESIGHTEIEVAAGALLGLLGSLAIYSL 236
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00084 236 Pfam Divergent PAP2 family 52 227 IPR003832 -
Sain12g00084 236 CDD PAP2-like 55 143 - -
Sain12g00084 236 PANTHER ACID PHOSPHATASE-VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 36 235 IPR003832 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00084 K09775 uncharacterized protein