Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sain12g00100	ATGAGTAGCTGGAGGAGTTTGATTTTGCGAATCGGCGAGAAGTCCCCTGAATATGGCGGAACAATCGATTACAAAGACCACATTGATGCTTGTTTTGGTGTGGTTCGGCGGGAATTAGAGCATTCTGAAGACGAAATATTGACTTTTCTTCTCCAATGTTCAGAGCAATTGCCTCATAAGATTCCTCTGTATGGGACGGTGATTGGGTTATTGAATTTGGAAAACGAGGAGCTTGTCAAGAAAATTTTGGAGAGTACTCAAAAGGGTTTGCAGGATGCACTTGACTCTGGAGATTGTAACAAGATCCGAGTATTAATGCGGTTTCTAACTGTTTTGATGTGTAGCAAAGTCGTTCAACCAAGTTCACTAGTGGTGGTTTTTGAAACGTTATTATCTTCTGCTGCAACTATAGTCGATGACGAGAAAGGGAACCCTTCATGGCAAGCCCGTGCTGATTTCTACATAACCTGCATTCTTTCCTGTCTTCCTTGGGGTGGATCTGAACTTGGCGAGCAAATTCCGGAAGAGATTGAAAGAGTTATGGTTGGGATAGAAGCCTATTTAAGTATCAGAAGACGTGTTTCTGATGTTGGTCTTTCTGTCTTTGAGGATATTAACAAAATCGATAAAGTTCACGTTGAACAGGATTTTGTGGAAGACTTATGGAGTCGAATCCAAGATCTCTCCAAGAACAGCTGGAAACTTGAGAGTGTTCCAAGGCCACATCTTTTATATGAAGCACAACTAGTAGCTGGGAAGTCTCATGATATTGGACCCATCAGTTGTCCTGAGCAAACCGATATCCCTGGGGAACTCTCTGGAGTCGATTTTGGTAGACAAAAGCATGAGGCAGAATTGAAATATCCTCAGAGGATACGAAGGCTCAATATATTTTCTGCTAGCAAAACTGAGGATCTACAGCCTATAGATCGCTTTGTCGTGGAGGAGTATTTATTGGATGTGCTCTTTTTCTTAAACGGATGTCGAAAGGAATGTGCTGCATGCATGGTTGGTCTACCAGTTCCTTTCAGATATGAATATCTCATGGCCGAGACAATTTTCTCTCAGCTTCTATTATTGCCTCAGCCACCATTCAAGCCTATATATTATACACTTGTCATAATAGACCTTTGTAAGTCTCTTCCAGGTGCCTTCCCTGCAGTTGTAGCTGGGGCTGTCCGTGCCCTTTTTGACAGAATAAGTGAGTTAGATATGGAGTGTCGAACACGCCTCATTCTTTGGTTCTCACACCATTTATCGAACTTTCAGTTCATCTGGCCCTGGGAAGAATGGGCTTATGTCTTGGAGCTTCCAAAATGGGCTCCACAACGTGTATTTGTTCAAGAGGTTTTGGATAGAGAAGTCCGTTTATCGTACTGGGATAAAGTGAAGCAGAGCATTGAAAATACCCCAGCGTTAGAGGAGTTGCTTCCTCCGAAAGGTGTTCCCGACTTCCGATATGGTTCAGAAGATGATGATAAAACTGAATACACACTTTCAACAGAACTTAACGGTATGGTGAAAGGAAGGAAAACGGCACGTGATGTTATCACGTGGCTTGAAGAAAGTGTAGTCCCTGTCAATGGAATGGATATTGCCCTCAGAGTAGTTGTTCAGACCCTTTTGGACATTGGATCAAAGAGTTTTACTCATTTGATTACTGTGTTGGAGAGGTATGGAAAAGTTATTGCGAGAATTTGTCCAGATGAAGAAGCTCAAATTATACTAATTGCGGAAGTTGGCTCGTTTTGGAAGAATAGTGCTCAGTCGACAGCCATAACGGTCGATAGAATGATGGGTTATCGGCTTATATCTAATTTGGCTATTGTCAAATGGGTCTTCTCTCCACCAAATGTCGAGCTATTTCACATTACAGATCGTTTATGGGAGATTCTGAGAAATGCTCTTAATAAAACATACAATCGCATATCTGATCTAAGGAAAGAGATTTCTCATCTGAAAAAGAGTGTGATAACAGCCGAGCAAAGTGCAGCGAAGGCTAAAGCCGAGTTGGATGCTGCTGAGACCAAGCTCATGCTTGTGGATGGTGAGCCTGTTGTTGGCGAAAATCCTGCTAGAATGAAACGTTTGAAGTCAAATGCTGCAAAGACAAAGGAGGAGGAGGTATCTACCCGTGAATCTTTGGAGTCAAAGGAGGCTCTTTTTGGACGAGCCCTTGAAGAAAATGAGGCCTTGTTTCTCTCTTTGTACAAAAATTTCTCGAATGTTTTAATGGATCGCCTCCATGAAACGTTTGGAGAGAAAACCTTGGAGCCTACTGGTGATTCAGAAGCAATGGCCGTCGATGAAGAAGACACATCTGCAATGGAGATGGAGGACAAAGAAAACGGAAGTTCCAAGAGGAATGTCGGCAATTCGAAGGGAAACATGGGTGGTACCGAATATGTCGTAGAGGAGAAAGAACAATGGTGTTTGTCAACTTTGGGTTATGTGAAAGCTTTTTCAAGGCAATATGCTTCTGAGATATGGCCACACATGGATAAATTAGAGGAGGAAGTACTAACGGAAAGTATTCATCCGCTATTCAGAAACGCCGTTTATTCTGGTTTACGCCTACACATCGGTCAATGA	2592	42.48	MSSWRSLILRIGEKSPEYGGTIDYKDHIDACFGVVRRELEHSEDEILTFLLQCSEQLPHKIPLYGTVIGLLNLENEELVKKILESTQKGLQDALDSGDCNKIRVLMRFLTVLMCSKVVQPSSLVVVFETLLSSAATIVDDEKGNPSWQARADFYITCILSCLPWGGSELGEQIPEEIERVMVGIEAYLSIRRRVSDVGLSVFEDINKIDKVHVEQDFVEDLWSRIQDLSKNSWKLESVPRPHLLYEAQLVAGKSHDIGPISCPEQTDIPGELSGVDFGRQKHEAELKYPQRIRRLNIFSASKTEDLQPIDRFVVEEYLLDVLFFLNGCRKECAACMVGLPVPFRYEYLMAETIFSQLLLLPQPPFKPIYYTLVIIDLCKSLPGAFPAVVAGAVRALFDRISELDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLELPKWAPQRVFVQEVLDREVRLSYWDKVKQSIENTPALEELLPPKGVPDFRYGSEDDDKTEYTLSTELNGMVKGRKTARDVITWLEESVVPVNGMDIALRVVVQTLLDIGSKSFTHLITVLERYGKVIARICPDEEAQIILIAEVGSFWKNSAQSTAITVDRMMGYRLISNLAIVKWVFSPPNVELFHITDRLWEILRNALNKTYNRISDLRKEISHLKKSVITAEQSAAKAKAELDAAETKLMLVDGEPVVGENPARMKRLKSNAAKTKEEEVSTRESLESKEALFGRALEENEALFLSLYKNFSNVLMDRLHETFGEKTLEPTGDSEAMAVDEEDTSAMEMEDKENGSSKRNVGNSKGNMGGTEYVVEEKEQWCLSTLGYVKAFSRQYASEIWPHMDKLEEEVLTESIHPLFRNAVYSGLRLHIGQ	863

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sain12g00100	863	Gene3D	-	295	481	-	-
	Sain12g00100	863	SMART	if4-15	1	229	IPR003890	GO:0003723(InterPro)\|GO:0005515(InterPro)
	Sain12g00100	863	MobiDBLite	consensus disorder prediction	772	794	-	-
	Sain12g00100	863	Pfam	MIF4G like	492	828	IPR015174	GO:0016070(InterPro)
	Sain12g00100	863	Gene3D	-	3	269	-	-
	Sain12g00100	863	Pfam	MIF4G like	343	467	IPR015172	GO:0016070(InterPro)
	Sain12g00100	863	FunFam	Nuclear cap-binding protein subunit 1	3	269	-	-
	Sain12g00100	863	PANTHER	CAP BINDING PROTEIN	4	858	IPR027159	GO:0000184(PANTHER)\|GO:0000339(PANTHER)\|GO:0000339(InterPro)\|GO:0003729(PANTHER)\|GO:0005634(PANTHER)\|GO:0005845(PANTHER)\|GO:0005846(PANTHER)\|GO:0005846(InterPro)\|GO:0006406(InterPro)
	Sain12g00100	863	Coils	Coil	636	684	-	-
	Sain12g00100	863	SUPERFAMILY	ARM repeat	294	478	IPR016024	-
	Sain12g00100	863	SUPERFAMILY	ARM repeat	478	851	IPR016024	-
	Sain12g00100	863	SUPERFAMILY	ARM repeat	2	296	IPR016024	-
	Sain12g00100	863	Pfam	MIF4G domain	24	223	IPR003890	GO:0003723(InterPro)\|GO:0005515(InterPro)
	Sain12g00100	863	Gene3D	-	489	854	-	-
	Sain12g00100	863	FunFam	Nuclear cap-binding protein	296	481	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sain12g00100	K12882	nuclear cap-binding protein subunit 1