Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sain12g00104	ATGGGTGATAGTCAGTACTCGTTCTCTCTTACCACTTTCAGCCCTTCTGGAAAGCTTGTTCAGATTGAACATGCCCTCACAGCTGTTGGCTCTGGTCAAACTTCATTGGGGATAAAAGCTTCTAATGGCGTCGTCATTGCAACAGAAAAGAAACTCCCATCCATTTTAGTTGATGAGACATCGGTGCAAAAGATTCAGATTTTGACTCCTAACATTGGAGTTGTATATAGTGGCATGGGGCCTGATTCTCGAGTTCTGGTCAGAAAGAGTAGGAAGCAGGCAGAGCAGTACAATCGGCTGTACAAAGAACCGATCCCTGTTACACAACTTGTAAGGGAAACTGCTGCTGTTATGCAAGAATTTACTCAGTCAGGTGGTGTAAGGCCTTTTGGTGTCTCACTCCTTGTTGCCGGTTACGATGACAAAGGTCCCCAGCTATATCAGGTGGACCCCTCAGGATCATATTTCTCCTGGAAAGCTTCGGCCATGGGGAAGAATGTCTCTAATGCAAAGACATTTCTTGAAAAGAGGTACACCGATGATATGGAGCTTGAGGATGCGATACACACAGCTATTTTAACATTGAAGGAGGGATTTGAAGGACAAATATCTGGCAAAAACATTGAGATTGGTGTTATCGAGGCCGACAAAACATTCAGAGTTCTAACTGCAGCTCAAATCGAAGACTATCTTCAGGAGGTGGAGTAG	708	44.49	MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDETSVQKIQILTPNIGVVYSGMGPDSRVLVRKSRKQAEQYNRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELEDAIHTAILTLKEGFEGQISGKNIEIGVIEADKTFRVLTAAQIEDYLQEVE	235

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sain12g00104	235	Gene3D	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	3	235	IPR029055	-
	Sain12g00104	235	SUPERFAMILY	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	5	234	IPR029055	-
	Sain12g00104	235	Pfam	Proteasome subunit	31	213	IPR001353	GO:0005839(InterPro)\|GO:0051603(InterPro)
	Sain12g00104	235	ProSiteProfiles	Proteasome alpha-type subunit profile.	21	231	IPR023332	-
	Sain12g00104	235	CDD	proteasome-alpha-type-2	6	231	-	-
	Sain12g00104	235	ProSitePatterns	Proteasome alpha-type subunits signature.	6	28	IPR000426	GO:0006511(InterPro)\|GO:0019773(InterPro)
	Sain12g00104	235	SMART	Proteasome-A-N-2	6	28	IPR000426	GO:0006511(InterPro)\|GO:0019773(InterPro)
	Sain12g00104	235	FunFam	Proteasome subunit alpha type	3	235	-	-
	Sain12g00104	235	PANTHER	PROTEASOME SUBUNIT ALPHA-BETA	4	232	IPR050115	GO:0010498(PANTHER)\|GO:0019773(PANTHER)
	Sain12g00104	235	Pfam	Proteasome subunit A N-terminal signature	6	28	IPR000426	GO:0006511(InterPro)\|GO:0019773(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sain12g00104	K02726	20S proteasome subunit alpha 2 [EC:3.4.25.1]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Sain	Sain-Chr10:159618241	Sain12g00104	Sain-Chr12:1377538	dispersed
	Sain	Sain-Chr12:1377538	Sain5g00883	Sain-Chr5:57763132	dispersed
	Sain	Sain-Chr12:1377538	Sain8g03019	Sain-Chr8:180040391	transposed