AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00113 ATGATGTCGGAGCACAGCAGCACAGTTAGTACGGCTAGCGGGCCGGATTTTAACCTACCCGATGAGATACTGTCGGTGATTCCCACGGATCCTTACGACCAGTTGGATCTTGCTCGGAAGATCACTTCAATGGCGCTTGCATCACGCGTTTCTAAACTGGAGTCGGAGGCAGGGAGGTTGAGGCAGAAACTTAACGAGAAGGATCGTGTTATAATGGAACTCGAAGGAAAAGTCTCTGAGCTTCAGCAAACATGTCATAATGTTCAATTGCGATTGCAGATTACACTCGAAGATAATACGAAACTTGCGGAGGAGAGAGATTCGTTGGCTATGGCTACTAAGAAGTTAGGGCGCGATTTATCTAAGCTGGAGACGTTCAAGCGACAATTAATGCAGTCGTTGAATGACAATGATTCAACTCAAGCAACAACTGTAGATATAGGCACCTATGACCACTCTGCTCCCAGAGCTTATCCCGTTAAAGAAGAGGAGACAAATGGCTATAGAAGACACCACTCTTTTAGTGGCTCAATAGATGGTGGAAACATCCCTAACGATGCCTCAAAGCATGCTGGTCAGAGGTTTTCTGTGATACCACATATCAGTGCTCGTGCAACTCCAACTGCAACTCCCAAGACGATCTCTGCAAGTGTATCTCCCAGAAGATATTCTGCTTCTGGTGCTACATCCCCAACAAAAATGCAATATGAAGGGCGTACTACACTGTCATCATGGTACTCTTCAAGCCAACAATCTTCTGCTGGAAACTCTCCTCCTCGTGGTCCCCCAATACCAGGCCGTACCTCTAAGATTGATGGAAAGGAGGTATTCCGTCAAGCAAGGAGCCGTCTATCTTATGAGCAATTCAGTGCTTTTCTGGCAAATATAAAGGAATTAAATGCTCAAAAACAATCTCGTGAGGAGACTCTGAGGAAGGCAGAAGAAATATTTGGGACTGATAACAAGGATCTTTATCTGTCGTTTCAAGGTTTGCTAAATCGCAACAAGCAATGA 1014 45.17 MMSEHSSTVSTASGPDFNLPDEILSVIPTDPYDQLDLARKITSMALASRVSKLESEAGRLRQKLNEKDRVIMELEGKVSELQQTCHNVQLRLQITLEDNTKLAEERDSLAMATKKLGRDLSKLETFKRQLMQSLNDNDSTQATTVDIGTYDHSAPRAYPVKEEETNGYRRHHSFSGSIDGGNIPNDASKHAGQRFSVIPHISARATPTATPKTISASVSPRRYSASGATSPTKMQYEGRTTLSSWYSSSQQSSAGNSPPRGPPIPGRTSKIDGKEVFRQARSRLSYEQFSAFLANIKELNAQKQSREETLRKAEEIFGTDNKDLYLSFQGLLNRNKQ 337
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00113 337 Coils Coil 50 91 - -
Sain12g00113 337 PANTHER OS03G0659800 PROTEIN 11 335 - -
Sain12g00113 337 MobiDBLite consensus disorder prediction 206 257 - -
Sain12g00113 337 Coils Coil 296 316 - -
Sain12g00113 337 MobiDBLite consensus disorder prediction 200 273 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00113 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr10:80246363 Sain12g00113 Sain-Chr12:1644556 dispersed
Sain Sain-Chr12:1644556 Sain1g00691 Sain-Chr1:50018676 dispersed
Sain Sain-Chr12:1644556 Sain2g01074 Sain-Chr2:72012093 transposed