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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00124 ATGAGTCGCATCGATCAACAAAACGAGATTCCAGTTGCGTATCCTCCTGCACCACAAGGCGCGTCGTATGTGATGGCACCACCGCCGGTAGGGTATCCGACGTGGGACGGCGGCGCCGCCAAAGCTGAAAACCAGGCTCACGTACAAACTCAGAGCAGAGGCGATGGCTTCTGGAAAGGATGTTGTGCTGCACTTTGTTGCTGTTGCGTGTTGGATGCCTGCTTCTAA 228 55.26 MSRIDQQNEIPVAYPPAPQGASYVMAPPPVGYPTWDGGAAKAENQAHVQTQSRGDGFWKGCCAALCCCCVLDACF 75
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00124 75 PANTHER RCG49325, ISOFORM CRA-A 1 75 IPR044850 GO:0005886(InterPro)|GO:0005886(PANTHER)
Sain12g00124 75 Pfam Cysteine-rich TM module stress tolerance 27 75 IPR028144 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00124 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:2041990 Sain14g01149 Sain-Chr14:28311900 dispersed