AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00126 ATGGCTGGCAATGCCAACGGCCTGCCGACTTTAGGCCGTGTGAAGCTCACGGACCTGATAGCTTCCGAAGGACTTCCTTCCGACACATACAAGCTATCAGTTTCAACTCTATCCCAATCACTCGCTCAATACTCTGCCGCCATCATCCAGTTTCCGCCAAGTGACGCCGCTCTCTTACGGTGTTGCCTCGAATCCGCTCGCCCGTACTTTACACAACGACCCACATATCCATCTGCAGATACAATTCACATTAACGACTCCCGTGAATGGTGCAAAACCTCCGGATACTCCGCCAATCCCCATTTATGGCAAGAAAATTACGATTATAGACCCGGGCTAACTTCCATAGACCCCAACAACGAACTCGAACTCCCGCCAGCTGGACTAGCGGATATATTCGTCTTACTCGGAAAAGCAGCCCGTGATATTCTTGATGCAATTGGGTTTTACTTAAATTTACGTAGCTGTGCGTTTACCGAGATTCTCGATAGTGTTCCGTTGAGAAATCGTGAAATTTCATCTTCGGTGGTGTCGATTGGTTGTCATGCACGGGCTTCGTTTTCGGGCGGTCAACACCACAGTTTGACCACCCAAGAGGACGGGCAGGTAATTATGTTCTCGGACCACGAGCACCAAGTTGATAAAAGTTTTATAACGCTTATGAAGTCGGATAAAGCGGGATTTCACGTTAGAGATTTCAACGGTCGTTGGGTGGTTGTGGACGGTGATCTTGGCCCGCAAGAAGCGGTTGTGTACCCTGGACTTGCGTTGTATCATGCGACTGCGGGTTATGTTAGCCCGGCACTGCACAGGGTCGATATTGGAAATTTGCATGGTAATGTGTGTGGGCGGTGTTCAGTTTCGTTCAAACTCATGCCGAAGTCCATGACGAGTCTTGATTGTTCGGAGATGAGAGCGGCTGGTCATGGTGTCGAAGCGCAGTTCCAGCTTCCGGTATCGGTTGATGACTTTATGCAGAGATCGCACTCGTTGGATCAACTCTTCAACAGAAACAGTTTCACAAGTTTTGGTTTTCCTGCAGCCCAAGATGGATCTATGAAACCGTTAACAAAGAGGAAGAAAAACACTTCTCGGTGTAAACCGTTGCCACCTTCTAAGCGATTGCGGCTTGAAGCGCAAAGAGTCCTTAAAGAGCGGGTTCAGGACATGGCCGATAAGAAAGGCATCAAGCTCCGATTCTGCACCCTAAAGGAGTGCGAGAGTCACATTCACACGCTCGATAGCCCATGTGGCAACATACGGTTGGAGATTGGGTGGCCACCGGGAGTTCCGTTTGTTCATCCCCATGATCTACCCAACAAGGCGAAGATTGGGTTTCTTGAAACATATGAACCGGGTTGGACAGCCAATCATGATATGGAGCTTAGTATGATCGAAGCTGGACAGTCGAGTCAACATGCGGAAAACTGA 1431 49.06 MAGNANGLPTLGRVKLTDLIASEGLPSDTYKLSVSTLSQSLAQYSAAIIQFPPSDAALLRCCLESARPYFTQRPTYPSADTIHINDSREWCKTSGYSANPHLWQENYDYRPGLTSIDPNNELELPPAGLADIFVLLGKAARDILDAIGFYLNLRSCAFTEILDSVPLRNREISSSVVSIGCHARASFSGGQHHSLTTQEDGQVIMFSDHEHQVDKSFITLMKSDKAGFHVRDFNGRWVVVDGDLGPQEAVVYPGLALYHATAGYVSPALHRVDIGNLHGNVCGRCSVSFKLMPKSMTSLDCSEMRAAGHGVEAQFQLPVSVDDFMQRSHSLDQLFNRNSFTSFGFPAAQDGSMKPLTKRKKNTSRCKPLPPSKRLRLEAQRVLKERVQDMADKKGIKLRFCTLKECESHIHTLDSPCGNIRLEIGWPPGVPFVHPHDLPNKAKIGFLETYEPGWTANHDMELSMIEAGQSSQHAEN 476
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00126 476 SUPERFAMILY Clavaminate synthase-like 136 306 - -
Sain12g00126 476 Gene3D - 23 331 IPR027443 -
Sain12g00126 476 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 3 474 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00126 - -