Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sain12g00128	ATGGAAAGATTTGGTGGTGGAGGTGATGATACTCAACAACTCGTTGATCCTCGAGATCCTAATCAACAACTTCGTTCGAATTCCGCAGGTGGTACAGTATTTGATGCATCACAGTATGCATTCTTTGGAAATGAAGTTCTTGAAGAAGTTGAGTTGGGAGGTCTGGAAGATGAAGAGGAAGACCTTCCGGCAGCCAAATTCGAGGATGAAGAGTATCAGTTGGAGCAAGAAGAGGGTGTGATTCCAGGAATCGATGATCTTGCCACCACATTTTCAAAGCTCAACAAAGATGTCATGGGGACAAGTGTTGGAGTTTTTGGTGACCAAGGATCCAGAGAAAATTCATCTGCAGCTGAATGGGCACAGGGAAGAGAATACACCAACTGGCTTGACCAGGATATTTTTGATGCAGAAAGTGCTCAGGATAGCAATAGATGGTCAAACCCTTCATTTCCTCTTCAAGATGCATCAATGCTTATTCACAGAACATCTTCCTACCCCGAGAAACATCAACAACAGAATCTTAACCAGCAGCTGAATGATGAATCAAAGCTGTACCTTCACAGAACATCGTCTTATCCCGAACAGCATCAACAACAGAACCTTAACCAGCACCTGCTAGACGAATCAAAGCATCTCCACAGAACATCATCTTACCCCGAGCAGCAGCAACAGCACCATCTTAATCAGCATCTACATTTCTCTAGTGAGCCGGTTCCAGTTCCCAAGTCTTCTTTCATCTCATACCCTCCACCTGGCGGTGGGTCCCCTCAACCTCCAGCAAGCCATCAATTACATCATCTTAACCCTCAGTTTCACGGCAGCGGCCACCAGATGCCGCCATCTTTCTCCAATATATCTCCACTGTCGAATCCACAGCTTCAGATGGGTGGGATGCCTCACGGGCCGCAATTTGGTGGGAATCTGCCTCAGTTTCGCCCTCCTGCTTCATCTGTTAATAACCGGATGCCGAACCAATGGACGGGTCAGAACAGTTTATATCCCGGAGACCAGCCCGATCTTTCAAACGGGATGTTGCAACAACAACTTGCTCATAAGAACGGGTTGCTGCCACCTCAGCAACATAGGATGCATCACCAGTTTCAACCACCTTTTGGCCATTTATCCGGGTTGCAACCCCAATTGCCCCAACTAATGAACCACCATCTATCTCCATCCCCACCACCAATGAACAAATTTGAAGTTTTTGGGATGGCGGGTCCCAGGGATCCAAGGCCTAAACCAATGCCCAAAGGTAGATATCCCCAATCGGGCCAGAGATATCCCCAATCGGGCTTTGATACCAGTGGATGGCCACAGTTTAAATCGAAATACATGTCAGCTGATGAAATCGAAAATATTCTCAGAATGCAACTTGCTGCTACACACAGTAACGATCCTTACGTTGATGATTACTATCACCAAGCTTGCCTGGCTAACAAATCTAGCGGTGCGAAATTAAGACACCATTTCTGCCCAACCCAATTGCGGGATTGTCCTCCCAGAGCTCGTGCCGCTAACGAGCCACATGCTTTTCTTCAGGTTGATGCTTTGGGACGGGTTTCATTTTCTTCAATACGTAGGCCCCGCCCACTTCTTGAGGTTGACCCGCCCAAGTCGGCCGCTAGCGGCAACACCGATCAGAAAATGTTGGATAAGCCACTGGAACAAGAGCCGATGCTAGCGGCTAGAGTCACAATTGAGGATGGCATTTGTCTTCTTCTGGATGTTGACGATATTGACCGCTTTCTTCAGTTCAATCAGCTCCAAGATGGTGGGGCCCAGTTAAGGCAAAGGCGACAAGTTTTACTCGAAGGATTAGCAACGTCACTTCAGCTTGTTGATCTGCTAGGCAAAAATGGTCAAACAGTAGAGTTGACCCCGAAAGATGATCTTGTTTTCTTACGATTAGTTTCTCTCCCAAAGGGCCGAAAACTTTTGTCAAGGTACCTCCAGCATCTTTCCCCTGGAAGCGAGTTAACTCGGATAGTTTGCATGGCAGTTTTTCGCCATTTAAGATTCTTGTTCGGAGGTGTTTCCTCAGATCCTGGAGCGGCGGCAACTGCCAATAATCTTGCGACAACTGTTTCGTCTTCTATTCGTGGGATGGAGCTTAGAGCTCTTGCCGCCTGTTTAGCGTCCGTTGTTTGTTCCACCGAGCATCCTCCACTTCGTCCTGTCGGAAGTCCTGCAGGCGACGGGGCTTCCGTCGTTATAAAATCCGTACTAGAAAGAGGAACCGAACTCTTAACGGACCCACATGCCGTCAGTAACTGCAGCATGCCAAATCGGGCGTTTTGGCAGGCCTCTTTTGATGCTTTCTTTGGACTTGTAACCAAATACTGTTTTAGTAAGTATGACACTGTTGTCCAATCGTTGCTGACACAGGGAGGTGGGCCCACCGATATGGCAGTTATCGGTTCGGATGCTGCAAAAGCTATTACACGGGAAATGCCGGTTGAACTCTTGCGTGCGAGCCTTCCTCATACGAATGAAAACCAGAGGAAACTGCTACTGGATTTTGCTCAACGGTCCATGCCTGTGCTCGGAATGAATAGCAGTGGGGCGGGAAATGGTGGCACTTGA	2586	47.91	MERFGGGGDDTQQLVDPRDPNQQLRSNSAGGTVFDASQYAFFGNEVLEEVELGGLEDEEEDLPAAKFEDEEYQLEQEEGVIPGIDDLATTFSKLNKDVMGTSVGVFGDQGSRENSSAAEWAQGREYTNWLDQDIFDAESAQDSNRWSNPSFPLQDASMLIHRTSSYPEKHQQQNLNQQLNDESKLYLHRTSSYPEQHQQQNLNQHLLDESKHLHRTSSYPEQQQQHHLNQHLHFSSEPVPVPKSSFISYPPPGGGSPQPPASHQLHHLNPQFHGSGHQMPPSFSNISPLSNPQLQMGGMPHGPQFGGNLPQFRPPASSVNNRMPNQWTGQNSLYPGDQPDLSNGMLQQQLAHKNGLLPPQQHRMHHQFQPPFGHLSGLQPQLPQLMNHHLSPSPPPMNKFEVFGMAGPRDPRPKPMPKGRYPQSGQRYPQSGFDTSGWPQFKSKYMSADEIENILRMQLAATHSNDPYVDDYYHQACLANKSSGAKLRHHFCPTQLRDCPPRARAANEPHAFLQVDALGRVSFSSIRRPRPLLEVDPPKSAASGNTDQKMLDKPLEQEPMLAARVTIEDGICLLLDVDDIDRFLQFNQLQDGGAQLRQRRQVLLEGLATSLQLVDLLGKNGQTVELTPKDDLVFLRLVSLPKGRKLLSRYLQHLSPGSELTRIVCMAVFRHLRFLFGGVSSDPGAAATANNLATTVSSSIRGMELRALAACLASVVCSTEHPPLRPVGSPAGDGASVVIKSVLERGTELLTDPHAVSNCSMPNRAFWQASFDAFFGLVTKYCFSKYDTVVQSLLTQGGGPTDMAVIGSDAAKAITREMPVELLRASLPHTNENQRKLLLDFAQRSMPVLGMNSSGAGNGGT	861

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sain12g00128	861	MobiDBLite	consensus disorder prediction	1	31	-	-
	Sain12g00128	861	MobiDBLite	consensus disorder prediction	410	434	-	-
	Sain12g00128	861	Pfam	Topoisomerase II-associated protein PAT1	517	668	IPR019167	-
	Sain12g00128	861	MobiDBLite	consensus disorder prediction	235	280	-	-
	Sain12g00128	861	MobiDBLite	consensus disorder prediction	15	31	-	-
	Sain12g00128	861	PANTHER	TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1	28	848	IPR039900	GO:0000290(PANTHER)\|GO:0000290(InterPro)\|GO:0000932(PANTHER)\|GO:0003723(PANTHER)\|GO:0033962(PANTHER)
	Sain12g00128	861	MobiDBLite	consensus disorder prediction	244	258	-	-
	Sain12g00128	861	MobiDBLite	consensus disorder prediction	262	280	-	-
	Sain12g00128	861	MobiDBLite	consensus disorder prediction	529	550	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sain12g00128	K12617	DNA topoisomerase 2-associated protein PAT1

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Sain	Sain-Chr12:2216421	Sain4g00921	Sain-Chr4:26143679	dispersed