AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00139 ATGAATCTCGCCACCTTGGCGCGAGCCTCACCTCTCCTAGCCACCACATCCGCATCAACAATTCTCCGTCGCTCCATCGCAATTAAACCCTTTTCATGTTCTTCGCTTTCTAACACACCCATTTCAATAAACCCTAAAACCCCACTCTTTCTCAGACCCCCCACCTTCTCCGCAACCCTATCCGACCTCCAAAAATGGCAAAATTGGGCCAAAACCCTAGCCTCCTCTGTTGGTTCATCTTTCACGGATTCAGATAACGGTCCAGACTCCGACAATTTGCAACGAGAACTTAATTGGTTCATCGAAGACGCGTTAGAAAACCCTAAATCATTATTATCTCGCAACGAATTTGAAATCGACTCTGTTTTGCATATGAGAGCTGATTTGGGTGATTTGTACTTGTTATGGAAGCAAAGGATTGAAAAGAGAAGACCTTTTCAATATGTTGTAGGGTGTGAGCATTGGAGGGATTTGGTGATAAGTGTTGAAGAAGGGGTTCTGATTCCAAGGCCTGAGACTGAATTAATTGTTGATTTGGTGTATGATGTGATTAAGGAGAATGAAGATTTGAAGGAAGGTTTGTGGGTTGATTTGGGGACTGGTAGTGGTGCAATTGCAATTGGGATTATGAGGATTTTAGGAGATTTTGGGAGAGTTATTGCAACTGATTTAAGTCCTGTTGCTGTTCAAGTTGCTTTATTCAATGTGAATAGGTATAATTTGCAGGATAAAATTTCTGTAAAGCAAGGGTCATGGTTCGAACCGTTGAGCGGGTTTGAAGGACGAGTTGCAGGCCTTGTAAGCAATCCACCATACATACCCAGTGGCCACATCAGTGGGCTCCAAGCCGAAGTTGGTAGACACGAACCAATACTGGCATTAGATGGTGGCGAAGATGGCATGGCTGACCTTCTACATCTTTGCAATGGTGCTGCTTTGATGCTAAAATCTGGCGGATTTTTCGCTTTTGAGACAAATGGTGAAGATCAATGCAGGTTTCTTGTGGACCATCTTGAAACCATTTACAGTGGCAGTTTCCACAATCTAAAGATCACACCAGATTTTGCTGGCATCAAGCGTTTTGTAACTGGGATCAGATCATAA 1104 43.39 MNLATLARASPLLATTSASTILRRSIAIKPFSCSSLSNTPISINPKTPLFLRPPTFSATLSDLQKWQNWAKTLASSVGSSFTDSDNGPDSDNLQRELNWFIEDALENPKSLLSRNEFEIDSVLHMRADLGDLYLLWKQRIEKRRPFQYVVGCEHWRDLVISVEEGVLIPRPETELIVDLVYDVIKENEDLKEGLWVDLGTGSGAIAIGIMRILGDFGRVIATDLSPVAVQVALFNVNRYNLQDKISVKQGSWFEPLSGFEGRVAGLVSNPPYIPSGHISGLQAEVGRHEPILALDGGEDGMADLLHLCNGAALMLKSGGFFAFETNGEDQCRFLVDHLETIYSGSFHNLKITPDFAGIKRFVTGIRS 367
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00139 367 PANTHER - 15 366 IPR052663 -
Sain12g00139 367 Gene3D Vaccinia Virus protein VP39 160 367 IPR029063 -
Sain12g00139 367 Pfam Ribosomal protein L11 methyltransferase (PrmA) 194 248 - -
Sain12g00139 367 CDD AdoMet-MTases 196 277 - -
Sain12g00139 367 ProSitePatterns N-6 Adenine-specific DNA methylases signature. 266 272 IPR002052 GO:0003676(InterPro)|GO:0008168(InterPro)|GO:0032259(InterPro)
Sain12g00139 367 NCBIfam HemK family protein methyltransferase 131 365 IPR004556 GO:0006479(InterPro)|GO:0008276(InterPro)
Sain12g00139 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 336 IPR029063 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00139 K02493 release factor glutamine methyltransferase [EC:2.1.1.297]