Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00139 | ATGAATCTCGCCACCTTGGCGCGAGCCTCACCTCTCCTAGCCACCACATCCGCATCAACAATTCTCCGTCGCTCCATCGCAATTAAACCCTTTTCATGTTCTTCGCTTTCTAACACACCCATTTCAATAAACCCTAAAACCCCACTCTTTCTCAGACCCCCCACCTTCTCCGCAACCCTATCCGACCTCCAAAAATGGCAAAATTGGGCCAAAACCCTAGCCTCCTCTGTTGGTTCATCTTTCACGGATTCAGATAACGGTCCAGACTCCGACAATTTGCAACGAGAACTTAATTGGTTCATCGAAGACGCGTTAGAAAACCCTAAATCATTATTATCTCGCAACGAATTTGAAATCGACTCTGTTTTGCATATGAGAGCTGATTTGGGTGATTTGTACTTGTTATGGAAGCAAAGGATTGAAAAGAGAAGACCTTTTCAATATGTTGTAGGGTGTGAGCATTGGAGGGATTTGGTGATAAGTGTTGAAGAAGGGGTTCTGATTCCAAGGCCTGAGACTGAATTAATTGTTGATTTGGTGTATGATGTGATTAAGGAGAATGAAGATTTGAAGGAAGGTTTGTGGGTTGATTTGGGGACTGGTAGTGGTGCAATTGCAATTGGGATTATGAGGATTTTAGGAGATTTTGGGAGAGTTATTGCAACTGATTTAAGTCCTGTTGCTGTTCAAGTTGCTTTATTCAATGTGAATAGGTATAATTTGCAGGATAAAATTTCTGTAAAGCAAGGGTCATGGTTCGAACCGTTGAGCGGGTTTGAAGGACGAGTTGCAGGCCTTGTAAGCAATCCACCATACATACCCAGTGGCCACATCAGTGGGCTCCAAGCCGAAGTTGGTAGACACGAACCAATACTGGCATTAGATGGTGGCGAAGATGGCATGGCTGACCTTCTACATCTTTGCAATGGTGCTGCTTTGATGCTAAAATCTGGCGGATTTTTCGCTTTTGAGACAAATGGTGAAGATCAATGCAGGTTTCTTGTGGACCATCTTGAAACCATTTACAGTGGCAGTTTCCACAATCTAAAGATCACACCAGATTTTGCTGGCATCAAGCGTTTTGTAACTGGGATCAGATCATAA | 1104 | 43.39 | MNLATLARASPLLATTSASTILRRSIAIKPFSCSSLSNTPISINPKTPLFLRPPTFSATLSDLQKWQNWAKTLASSVGSSFTDSDNGPDSDNLQRELNWFIEDALENPKSLLSRNEFEIDSVLHMRADLGDLYLLWKQRIEKRRPFQYVVGCEHWRDLVISVEEGVLIPRPETELIVDLVYDVIKENEDLKEGLWVDLGTGSGAIAIGIMRILGDFGRVIATDLSPVAVQVALFNVNRYNLQDKISVKQGSWFEPLSGFEGRVAGLVSNPPYIPSGHISGLQAEVGRHEPILALDGGEDGMADLLHLCNGAALMLKSGGFFAFETNGEDQCRFLVDHLETIYSGSFHNLKITPDFAGIKRFVTGIRS | 367 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00139 | 367 | PANTHER | - | 15 | 366 | IPR052663 | - | |
| Sain12g00139 | 367 | Gene3D | Vaccinia Virus protein VP39 | 160 | 367 | IPR029063 | - | |
| Sain12g00139 | 367 | Pfam | Ribosomal protein L11 methyltransferase (PrmA) | 194 | 248 | - | - | |
| Sain12g00139 | 367 | CDD | AdoMet-MTases | 196 | 277 | - | - | |
| Sain12g00139 | 367 | ProSitePatterns | N-6 Adenine-specific DNA methylases signature. | 266 | 272 | IPR002052 | GO:0003676(InterPro)|GO:0008168(InterPro)|GO:0032259(InterPro) | |
| Sain12g00139 | 367 | NCBIfam | HemK family protein methyltransferase | 131 | 365 | IPR004556 | GO:0006479(InterPro)|GO:0008276(InterPro) | |
| Sain12g00139 | 367 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 135 | 336 | IPR029063 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00139 | K02493 | release factor glutamine methyltransferase [EC:2.1.1.297] |