Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sain12g00148	ATGTCTGGTGGCGTTCACAATGATCACGCTGTACAGTTGCGGTCGAATTCTTCGTCTTCAGGCGACGATTTGGAAGATCAATCATCATCTGTAAGAAGTAGTAAAGGAATTAAGGAGATTTGGAAAAAGTTGGATCGACGGTTTTCTGGTCGACGTTTAAGTATTAAGCGACGGTTGCCGAGGGAAAACCGGTCAGATTGCGATTATGCGACGGCCAGCGGTGGCGGTAGCGGAGGAAGAGGCGGCGGCGTTGCTGGTGGCGATGAGATCCTTGGAGATGGAGCTCTTCCCGAATGGGCGCTGCTGCTTATTGGATGTCTTCTTGGCCTGGCTACCGGTCTCTGTGTCGCTGCTTTTAATCGTGGGGTGCATGTAATACATGAATGGTCTTGGGCTGGTACTCCAAACGAAGGTGCTGCTTGGCTACGTTTACAGAGACTGGGTGACACTTGGCATCGGATACTTCTGATACCCGTAACTGGAGGAGTGATTGTTGGGGTGTTGCATGGTTTACTTGAAATATTACACCAGATAAAACAGTCAAATCCTGGACATGACTTTAACCTGCTTTCTGGAGTCTTTCCAATCGTGAAGGCTATCCAAGCTGCTGTAACCTTAGGCACTGGCTGTTCTTTGGGTCCTGAAGGACCGAGTGTAGATATCGGGAAATCATGTGCCAATGGATTCTCATTAATGATGGAAAATAACAAGGAACGCAGGATTGCTCTTGTTGCAGCTGGTGCAGCTGCTGGCATATCTTCAGGTTTCAATGCAGCAGTAGCTGGGTGTTTCTTTGCCATTGAGACTGTGTTAAGGCCTCAACGTGCTGAAAACTCTCCCCCTTTCACCACTGCAATGATAATATTGGCATCAGTTATTTCGTCAACTGTGTCAAGTGTTATACTTGGAGAAAAGCAGGCTTTCACAGTGCCGAAGTATGATCTGAAATCTGCCGCTGAACTACCTCTCTACTTGATCCTGGGAATGCTATGTGGTGTGGTTAGTGTGCTATTTACTCGCTTAGTAGCTTGGTTCAACAATGCATTTGCATATATCGAGGAAACGTTTGGACTTCCTGCTATCGTTTCTCCGGCATTAGGTGGTCTAGGAGCAGGATTGATAGCTCTAAAATATCCCGGAATTCTTTACTGGGGCTTCACTAATATTGACGAAATTTTACATACCGGAAAGACGGCTTCGGCACCTGGGATCTGGCTATTAGCGCAGTTAGCTGCCGCTAAAGTTGTGGCTACGGCTCTTTGCAAAGGTTCAGGGCTTGTTGGTGGCTTGTATGCACCAAGTTTGATGATAGGTGCTGCAGTTGGTGCCGTTTTTGGAGGTTCAGCTGGGAAATTAATTAACTCAGCCATATCGGGCAATGCTGCTATTGCCCAGCCACAGGCGTATGCTTTAGTTGGAATGGCTGCTACTTTGGCTTCTGTTTGTTCTGTACCCTTGACCTCAGTTCTGCTTCTGTTTGAGCTGACAAAGGATTATAGAATCTTGCTTCCTCTCATGGGAGCCGTTGGATTGGCAATATGGGTGCCATCTGTAGCGAACCAATCTAAGGAAGCTGAGGGATCTGATACAAGGAGTTCATCAAGAGGGTATTCCATTCTTTCACCAATTGATGATTGGAGACAAAATGGCGAAGATGATTTGGAACTTTGCATAATGGGACCCGGTGATAGCCATGAAGCAATTGATGAGGATATAATTTTGGAGGATTTGAAGGTTTCTCAGGCTATGTCAAACAACTATCCGAAAGTCCTATTATCATCAACTGTTAACGAGGCTGTAAAATGCATGAACGATGGCCAACAAAGTTGTGTGCTTGTCGTTGACCCTGAAGATCACCTGGAAGGGATTCTAACCTATGGTGACATTAAAAGGGGCATTTTTAAGACCCCTAATGAATCCTCCGACAATGGTTCATCAACTTCCAATTTAAGTGAGTATTTGGTTTCTTCCATCTGCACTCGAGGGATAAACTATCGTGGAAGAAAGCGTGGACTTTTAACTTGTTATCCCGATACTGATTTGGCAATTGCTAAAAAACTAATGGAGGCCAAAGAAATCAAGCAATTGCCCGTGGTACAGCATGTCGTTGATTTTCATGAAGAAAGAAAGCGCAGGGTTGTTGCCATTCTCTACTACCATTCCGTCTGGAGCTGTCTCAGAGAGGAGCTAAATCGTAGGGGCACACGGAGGACCGAAGACCATATCGAAGAGAAGAGTTCCAATGGGTAG	2250	45.87	MSGGVHNDHAVQLRSNSSSSGDDLEDQSSSVRSSKGIKEIWKKLDRRFSGRRLSIKRRLPRENRSDCDYATASGGGSGGRGGGVAGGDEILGDGALPEWALLLIGCLLGLATGLCVAAFNRGVHVIHEWSWAGTPNEGAAWLRLQRLGDTWHRILLIPVTGGVIVGVLHGLLEILHQIKQSNPGHDFNLLSGVFPIVKAIQAAVTLGTGCSLGPEGPSVDIGKSCANGFSLMMENNKERRIALVAAGAAAGISSGFNAAVAGCFFAIETVLRPQRAENSPPFTTAMIILASVISSTVSSVILGEKQAFTVPKYDLKSAAELPLYLILGMLCGVVSVLFTRLVAWFNNAFAYIEETFGLPAIVSPALGGLGAGLIALKYPGILYWGFTNIDEILHTGKTASAPGIWLLAQLAAAKVVATALCKGSGLVGGLYAPSLMIGAAVGAVFGGSAGKLINSAISGNAAIAQPQAYALVGMAATLASVCSVPLTSVLLLFELTKDYRILLPLMGAVGLAIWVPSVANQSKEAEGSDTRSSSRGYSILSPIDDWRQNGEDDLELCIMGPGDSHEAIDEDIILEDLKVSQAMSNNYPKVLLSSTVNEAVKCMNDGQQSCVLVVDPEDHLEGILTYGDIKRGIFKTPNESSDNGSSTSNLSEYLVSSICTRGINYRGRKRGLLTCYPDTDLAIAKKLMEAKEIKQLPVVQHVVDFHEERKRRVVAILYYHSVWSCLREELNRRGTRRTEDHIEEKSSNG	749

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sain12g00148	749	FunFam	Chloride channel protein	89	531	-	-
	Sain12g00148	749	Pfam	CBS domain	579	633	IPR000644	-
	Sain12g00148	749	PANTHER	CHLORIDE CHANNEL PROTEIN CLC-E	29	736	IPR050368	GO:0005794(PANTHER)\|GO:0009507(PANTHER)
	Sain12g00148	749	Pfam	Voltage gated chloride channel	178	515	IPR001807	GO:0005247(InterPro)\|GO:0006821(InterPro)\|GO:0016020(InterPro)\|GO:0055085(InterPro)
	Sain12g00148	749	CDD	Voltage-gated-ClC	111	512	-	-
	Sain12g00148	749	Gene3D	Clc chloride channel	93	529	-	-
	Sain12g00148	749	SMART	cbs-1	671	727	IPR000644	-
	Sain12g00148	749	SMART	cbs-1	586	634	IPR000644	-
	Sain12g00148	749	ProSiteProfiles	CBS domain profile.	583	640	IPR000644	-
	Sain12g00148	749	Gene3D	-	563	726	IPR046342	-
	Sain12g00148	749	SUPERFAMILY	CBS-domain pair	577	730	IPR046342	-
	Sain12g00148	749	PRINTS	Chloride channel signature	198	217	IPR001807	GO:0005247(InterPro)\|GO:0006821(InterPro)\|GO:0016020(InterPro)\|GO:0055085(InterPro)
	Sain12g00148	749	PRINTS	Chloride channel signature	426	446	IPR001807	GO:0005247(InterPro)\|GO:0006821(InterPro)\|GO:0016020(InterPro)\|GO:0055085(InterPro)
	Sain12g00148	749	PRINTS	Chloride channel signature	467	483	IPR001807	GO:0005247(InterPro)\|GO:0006821(InterPro)\|GO:0016020(InterPro)\|GO:0055085(InterPro)
	Sain12g00148	749	PRINTS	Chloride channel signature	485	504	IPR001807	GO:0005247(InterPro)\|GO:0006821(InterPro)\|GO:0016020(InterPro)\|GO:0055085(InterPro)
	Sain12g00148	749	PRINTS	Chloride channel signature	249	268	IPR001807	GO:0005247(InterPro)\|GO:0006821(InterPro)\|GO:0016020(InterPro)\|GO:0055085(InterPro)
	Sain12g00148	749	MobiDBLite	consensus disorder prediction	9	35	-	-
	Sain12g00148	749	SUPERFAMILY	Clc chloride channel	98	519	IPR014743	-
	Sain12g00148	749	MobiDBLite	consensus disorder prediction	1	35	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sain12g00148	K03281	chloride channel protein, CIC family

Event-related genes

Select	Gene_1	Gene_2	Event_name
	138642	Sain12g00148	Sain9g00025

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Sain	Sain-Chr12:2677777	Sain13g02726	Sain-Chr13:139692579	dispersed
	Sain	Sain-Chr12:2677777	Sain9g00025	Sain-Chr9:1129205	wgd